Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi464g00054 ATGGCTGCTGCTGCATACGACGTCGCTGCGTTGCATTTCAGGGGACGTGAAGCCAGGCTTAACTTCCCTGAACTCGCAACTACTCTTCCTCGTCCCATAAGCAACAATGCTGACCACATACGCATGGCGGCGCACGAGGCTGCTTTAAGGCTTAGGACCAACACGGTGGCGCCGGAGACTGGTGGCTCCGCCGGTTCAACCACCGGGGCACCACTGACGGTTAGACTCTCCCCGACTCAAATTCAGGCCATCAATGACTCGCCTCTTGACTCACCACCGACGTGGATGCAAATGTCACATCCTTTCATGTTTGATGATCAGTCCATGATGTTTGCAAATGGGCAAGAGGAGGAGAAGGACAGCTTACTGTTTCATAGAATTCCATTTGTTCAAGGGAAGAATACCATTTTGTATTGTCAGATAAGGCAGTATTTTGGGGGGTCCCATGAATGCTATGTATACGTGGAGTGGAAGAGCGTGACCAGTGAGGAGCAGACAGTTACAGTTGCTACCACAAGCTTTGATGATGATGAAGTTGTAGATTCAGCTGCAGCTGTTGTGAGGAATTTCTATGGAGGAATCAATGCGCATGACGTGGATTCTGTACAGTACCTTATCGCCGAGAATTGTGTGTATGAAGACCTTGTCTTTCCCCGGCCTTTTGTAGGTCGTAAGGAAATTCTAGAGTTCTTCAAAAAGTTCACTAATTCTACCAGCAAAGATCTGCAGTTTGTTATTGATGATTTGTCCACCGAGGACTCCTCATCGGTTGGAGTCACATGGCATTTAGAATGGAAGGGAAGGCCTTTTCCCTTTAGCAAAGGATGCAGTTTTTATCGTTTGGAGGTGATCAATGGCAAGAGACAAATAACATATGGGCGAGACTGTGTTGAACCTGCAATCAAGCCTGGGGATGCAACTTTGGCAGTGATCAGGAGTGTGACATGGCTTCTTCAGCAATTTCCTCAGTTGGCAGATCGGTTATAG 987 0.4782 MAAAAYDVAALHFRGREARLNFPELATTLPRPISNNADHIRMAAHEAALRLRTNTVAPETGGSAGSTTGAPLTVRLSPTQIQAINDSPLDSPPTWMQMSHPFMFDDQSMMFANGQEEEKDSLLFHRIPFVQGKNTILYCQIRQYFGGSHECYVYVEWKSVTSEEQTVTVATTSFDDDEVVDSAAAVVRNFYGGINAHDVDSVQYLIAENCVYEDLVFPRPFVGRKEILEFFKKFTNSTSKDLQFVIDDLSTEDSSSVGVTWHLEWKGRPFPFSKGCSFYRLEVINGKRQITYGRDCVEPAIKPGDATLAVIRSVTWLLQQFPQLADRL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi464g00054 328 Gene3D - 162 292 - -
Sebi464g00054 328 Gene3D AP2/ERF domain 1 24 IPR036955 GO:0003700|GO:0006355
Sebi464g00054 328 PANTHER NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEIN 116 327 - -
Sebi464g00054 328 Pfam Nuclear transport factor 2 (NTF2) domain 183 301 IPR002075 -
Sebi464g00054 328 SUPERFAMILY NTF2-like 181 296 IPR032710 -
Sebi464g00054 328 ProSiteProfiles AP2/ERF domain profile. 1 23 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi464g00054 Sebi-Chr464 570101 573949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi464g00054 1 112 AP2-EREBP Transcription Factor Family AT1G71450 55.263 8.27e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi464g00054 - - gmx:100813246 299.671