Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi463g00041 ATGAGTGGAGCGAAGGGGAAGAAGAAGGGAGTGAGCTTCGTGATCGATTGCGCGAAGCCAGTGGAGGATAAGATTATGGACATTGCTTCTCTTGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGCGGCAAGGCCGGTGCCCTCGGTGATTCCATTACCGTTACTCGGGAAAAGACCAAGATCACCGTCACCTCCGACAGCAACTTCTCCAAACGGTATCTGAAATACTTAACCAAGAAGTACCTGAAAAAGCACAATGTGAGGGATTGGCTTCGGGTGATTGCCTCCAACAAGGACCGGAATGTCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTAA 360 0.4861 MSGAKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVTREKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi463g00041 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Sebi463g00041 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
Sebi463g00041 119 Gene3D - 1 119 IPR038526 -
Sebi463g00041 119 PANTHER 60S RIBOSOMAL PROTEIN L22 3 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi463g00041 Sebi-Chr463 449947 451136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi463g00041 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 89.655 2.13e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi463g00041 K02891 - gmx:100500073 220.32