Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi463g00039 ATGGTTAATCTGGTGTTTCCTTACGAGTTTTACCATGCAAGGGAGGATGTGATAAGGATTAGGTTAGAACTTGTTGATCAGTTTGATCATCAGTTTAGCATTCCTCTTAAATTTGGTAGGAATATTGTGGTAATGTGGGAAGTTTTTTCACAGTTGAAGCGCTTTTATGGTTTTGATAAGACTATGTATCTTCATCTTAAATATGAGGGTGGTATAAGATTCAGCTTTGAGGTTAAGGATGAAGATGGTATTCCTCTAACCCCTGGCTTAGTTCATCGAAGTGGGACAAGTGGTGTTGGCAATCCTGACATAGTTAATGTCAATTCTGAGAATCCAACTGAGAATCCTGGGGGTATTGAGAATCCAAGTGGTCCTCAGAATGGAGTTGTTGGTAGGAGGGTTATGACTTGTTGGAAACAAACTCTTCCTCACAGTGTGTCTGTTGGTAGGAAGGTTATGAGTTTTCAAAATCAATCTGGACGTGTGACTATTGTTGCTGGTAGGACGGTTATGAGTTTTGAGAAAGTCATAACAAAGAGTAAATCAAAAGGTGGACAGACCCTGCCTATACCAAGGAATTTTGTTAAAGAATTTATTCGAAATTCCTGGAGAAGGTTGATCCTACAAGTTAAAGGTGGTCAATGTTACTACTGTAAATTGTTGTGGCGAAAAGGAAGAGAAAAAGATTACCACCTTGGCAAACCTTGGTACAAGTTAGTTTCTGATATGAGACTAAGAACAGGGGACAAAGTTGTTTTCAAGACAAATATGAACGGAGGCTTAAACACAGTCAACGTGACTATCATTCGGAGGGGGAATTAG 822 0.3917 MVNLVFPYEFYHAREDVIRIRLELVDQFDHQFSIPLKFGRNIVVMWEVFSQLKRFYGFDKTMYLHLKYEGGIRFSFEVKDEDGIPLTPGLVHRSGTSGVGNPDIVNVNSENPTENPGGIENPSGPQNGVVGRRVMTCWKQTLPHSVSVGRKVMSFQNQSGRVTIVAGRTVMSFEKVITKSKSKGGQTLPIPRNFVKEFIRNSWRRLILQVKGGQCYYCKLLWRKGREKDYHLGKPWYKLVSDMRLRTGDKVVFKTNMNGGLNTVNVTIIRRGN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi463g00039 273 SUPERFAMILY DNA-binding pseudobarrel domain 170 258 IPR015300 -
Sebi463g00039 273 SMART B3_2 173 272 IPR003340 GO:0003677
Sebi463g00039 273 Pfam B3 DNA binding domain 173 271 IPR003340 GO:0003677
Sebi463g00039 273 CDD B3_DNA 172 270 IPR003340 GO:0003677
Sebi463g00039 273 Gene3D - 155 272 IPR015300 -
Sebi463g00039 273 ProSiteProfiles B3 DNA-binding domain profile. 173 272 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi463g00039 Sebi-Chr463 424488 425547 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi463g00039 B3 1.4e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi463g00039 - K05127 lja:Lj0g3v0086279.1 106.686