Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi462g00059 ATGTCAAAAGAAGCAGAGTATTGTGTCCATGACAGGCACAAGAGGAACTATTGGTATATAGCACCAGAAGTTTTCAGCCGAGCATTTGGTGGAGTTTCTTACAAGTCTGATGTATATAGTTATGGCATGCTCATTCTTGAAATGATTGGAGGAAGAAAGAGCCATGATACTGGAGGGTCACATACCACAGAGATGTACTTTCCAGACTTGATATATAAGGATCTTGAGCAAGGAAATAATCTTGCAAAATGTTTGGGGGTCTCAGAGGAAGATAATGATATGGTAAGGAAGATTACTATGGTGAGTCTATGGTGTATTCAAACAAACCCATTAGATAGGCCATCAATGAATAAAGTGATAGAAATGTTAGAAGGACCACTTCAGTCAGTGTCATATCCTCCAAAGCCTGTCTTATATTCTCCTGAAAGGCCATCATTACAAATTTCAAACATGTCCTCCGGTAATTTGTATGAGACAAATTCAATTACCATGCAGAAGGATAGTTCTAAAAGATCAAATGAGTCTAGCAATGACAATTAA 540 0.3778 MSKEAEYCVHDRHKRNYWYIAPEVFSRAFGGVSYKSDVYSYGMLILEMIGGRKSHDTGGSHTTEMYFPDLIYKDLEQGNNLAKCLGVSEEDNDMVRKITMVSLWCIQTNPLDRPSMNKVIEMLEGPLQSVSYPPKPVLYSPERPSLQISNMSSGNLYETNSITMQKDSSKRSNESSNDN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi462g00059 179 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi462g00059 179 MobiDBLite consensus disorder prediction 143 179 - -
Sebi462g00059 179 Pfam Protein tyrosine and serine/threonine kinase 3 123 IPR001245 GO:0004672|GO:0006468
Sebi462g00059 179 SUPERFAMILY Protein kinase-like (PK-like) 10 165 IPR011009 -
Sebi462g00059 179 Gene3D Transferase(Phosphotransferase) domain 1 2 135 - -
Sebi462g00059 179 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 148 IPR045874 GO:0004672
Sebi462g00059 179 MobiDBLite consensus disorder prediction 131 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi462g00059 Sebi-Chr462 779477 780016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi462g00059 1 142 Receptor kinase-like Gene Family AT5G38280 48.299 1.21e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sebi462g00059 PK_Tyr_Ser-Thr 2.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi462g00059 - - mtr:11438961 245.358