Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi462g00048 ATGGGTGGGTGGGTCCATCGTCGTTTTGCAGCATCAGAGGTTGCTTTCTGCCTCAGTGCTGTCGTGGGTAGCACAGGGGTTTTGCAGGAGATGAATGATTCTACGGTGAAGAGTTTGGCCATTGCGGATAAGAAGGTACAAAAACCTGGTGGCTGTGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGGAGACTCTCTAAGAAAAAGCTCTTCTCCAAGAAACTCCTTCCTCCTGCTCGTGCAAAAAAGTTTAGGGGAGATGAAAAAATGCCAAGTTCCAAGCTCCACTTGATTGCTAATGAGAATAGTGGTGGTTTCCCTAGTGCCAGAAAAAGTGGGAATCATGGTGTAATTGTAGATCAAAAGAGTGAAATGAGAGTTCCGAGTTTGGTAGCTAGGTTGATGGGTCTAGAATCTATTCCATCAGCTCAGCGAGATAAGTCAAAGAAAGCTTCATATTCTCATGGTTGTGGTGATGGAAAGAAAGAGTCTTTGGCTAATCATTGTGAGTTGGATAGGCAAGGTGTTGATTTAGAAGTGGGAGTTGTAAAGTATGATTCAAGACCTCAGAAACTTCAGAAAACTGGGGCTTGTGAGAGAAAGGCAGTGACTAGGTTTGGGGCAGAAGCCCTTCATATTAGGAGTGTTTTGTCACGAGCAAAAAAGTATAACCATCAACATCATCATCCAAAGCTTGCTTCTCCTTTGAAGAGCCCAAGAATTACTTCTGGAAAAAGTGCTTCTCGAAGCTCTAGGTTAATAGGAGCAGCTACTAAAATTTTGGAACCTGGACTGCAGGCTAGAAGTAGAGCTAAAGGTTCTCTTACATATCCTGCTTCCATGTATCCTCCTAAAACTGGCATTGTGACAAATGGTGCAGGAAATAAGTCAGTAGTTATGCAAAACCAATCTTGTTATGATGCCAGCACAGCCAAGCCTTTGATGGGGCAAACTTCTTGCAAAAATTGTGGTAATTTGCTTGATGTTATTGACTCCAAGCCAGTGGTTGGGGGACAGCCAGCATTTCCTCCACCAATTGTTTCAGATGTGATCACTGCTACTACCTCTATGGTTTCATCACAGAAGATGGGAAAGTCATTAACTCCCTCTCATGGACAAGAAAGAGATATTGTTCTTTTGAGAAGTCAGGAAAAGCTCATATCTCTTGTTACTGAAGAAGAGGGTAAGAATAATGCACAACAGTCATGGAATCAACCTGCTAGTGCTACCAGAAGAATGACAATGCTCCATGAAGGTCCAGCTAAATGGAATTCATCATGCCAACCATTGAGGGGCCTAGAGGACAATGCATCTTCTTTTGCCTTAAAACACAAAACTCAGACACAAGAACAGATGTTAAACAGTGAAAGATATTCATCTGTATCTACAATGAGTAATGTGCAGGTAAAAAGAGTATCATCGTCTGCGAGCACCATGAGTGGGAGTGGGAGTGGGACTAAAGACTTTGTTGCCTTGAATAGAAGCCTAAGTGGTCGAACAAGGATGAGGTCACCTACCAAAATGGATAATTCCAAATTTGACTTAGAGAAAAAACCTTGTAATAGACAGCATAATTCCTTGTCTCATGTAAGGACATTGGAGAGGAAAAGAAGGACCCCAAATGTCACACAACTTGAAGGCACAGCTTCTGTTAATTCAGTTGGTGTGAAACAGAGAAATCTCCATTCCAATGCAGTGGGTGGGAAAAGGAGGGACTTTGACTCTTCCTCCTCAAACAGTTCTAATGTTAAAAGCGAACGAGATGGACAGGGAGAAACAAAGAAGGTTCATGACAATAAGATCAAGGATGTAGTTTCATTCACATTTAATTCCCCCTCGAGGCAAAAGATTGGAATACTTTCTGAGAAGGAAGAGACAAGCAGTGACAATGAGCGGAGGACATACTTCCAAAGACCTTCACCCTTGAAAGTTAATGCTTTAGGTGCCTTTCTAGAACAAAAGTTGAAGGAATTAACCTCTCAAGAAAATGAGGAGCTGGCTACAGGTGCTCTACCTGAAAAATCAAGTACCATGATTCTTCAAGAGCTTATATCTGCTCTAAGTTCAGAGCATTTGATCTGTCATGGTGGTAATATGTTTAATGAAAACTATGGTTTCCATATGCCGTGCTTGCTATACAGTGCATTGCTTGAGTCTAAAGTTTCCTTCTTCAATACTGTTGGATATACTGCATGTGGGGCAAAACAAGAATGTTTATTAGGAACCTCTTTCAATGGTAATCATCTCAGTCCTGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGAATGTTTTTCACCCTGACTCCATGAATTACTCACATGGTCCACTGGAACAATTGGAACATGATACTGAACTTGTAGATTCTGCAACATCTTTTAACAAAGGAAGGATAGTTGAGATCATGACTGATCTTGTCAACCAAATTCCTAGAGCATTACAATGTCTATATTCTTTTGGGACACAATTGACAAGAAGCAAGCTCAATAATATGAATGATGTTCTCTTGAATGCTGAATTGGTGCTTGGAATTGCAACTGACCACAATGAGGATGAAGTGCCACAGCTTTTAATTTATCAGTTTCTCCTTCATGAATTGGACACTATGGCAGGTGATGCTATGTGGACAGATTTTAATGGCTTTATGGGTTGTGAGGATTCTAAACAGAGAGAGAAACTCAAAGGATTTGTCTTTGATTGTGTTATGGAATATCTAGAATCAAATTGTTGCCAATATTTTTACTCTGGATTCAAGGCATGGATTAAGCTCCCATTATGCATAAAAGCTGAGATGTTGGCTCAAGAGGTTAAGAGGGAGATCAAGAACTGGGCAGGTATGGTTGGGATGGTACCTGACAGAATAATAGAATGGGAGATGAGCCACTCCCTGGGGAAATGGACTGACTTTGATATTGAAGCATTTGAAGCTGGTGTTGATATAGATGGGGACATACTTCAAATTTTGGTTGATGAAATTGTTGAAGATCTTGGAGGTTGCAAGCAGAGCTCTATTTCCTTCTAA 3045 0.4102 MGGWVHRRFAASEVAFCLSAVVGSTGVLQEMNDSTVKSLAIADKKVQKPGGCVGIFFQLIDWKRRLSKKKLFSKKLLPPARAKKFRGDEKMPSSKLHLIANENSGGFPSARKSGNHGVIVDQKSEMRVPSLVARLMGLESIPSAQRDKSKKASYSHGCGDGKKESLANHCELDRQGVDLEVGVVKYDSRPQKLQKTGACERKAVTRFGAEALHIRSVLSRAKKYNHQHHHPKLASPLKSPRITSGKSASRSSRLIGAATKILEPGLQARSRAKGSLTYPASMYPPKTGIVTNGAGNKSVVMQNQSCYDASTAKPLMGQTSCKNCGNLLDVIDSKPVVGGQPAFPPPIVSDVITATTSMVSSQKMGKSLTPSHGQERDIVLLRSQEKLISLVTEEEGKNNAQQSWNQPASATRRMTMLHEGPAKWNSSCQPLRGLEDNASSFALKHKTQTQEQMLNSERYSSVSTMSNVQVKRVSSSASTMSGSGSGTKDFVALNRSLSGRTRMRSPTKMDNSKFDLEKKPCNRQHNSLSHVRTLERKRRTPNVTQLEGTASVNSVGVKQRNLHSNAVGGKRRDFDSSSSNSSNVKSERDGQGETKKVHDNKIKDVVSFTFNSPSRQKIGILSEKEETSSDNERRTYFQRPSPLKVNALGAFLEQKLKELTSQENEELATGALPEKSSTMILQELISALSSEHLICHGGNMFNENYGFHMPCLLYSALLESKVSFFNTVGYTACGAKQECLLGTSFNGNHLSPGSVLEASFSSSSLDESSGNVFHPDSMNYSHGPLEQLEHDTELVDSATSFNKGRIVEIMTDLVNQIPRALQCLYSFGTQLTRSKLNNMNDVLLNAELVLGIATDHNEDEVPQLLIYQFLLHELDTMAGDAMWTDFNGFMGCEDSKQREKLKGFVFDCVMEYLESNCCQYFYSGFKAWIKLPLCIKAEMLAQEVKREIKNWAGMVGMVPDRIIEWEMSHSLGKWTDFDIEAFEAGVDIDGDILQILVDEIVEDLGGCKQSSISF 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi462g00048 1014 MobiDBLite consensus disorder prediction 224 250 - -
Sebi462g00048 1014 MobiDBLite consensus disorder prediction 506 542 - -
Sebi462g00048 1014 Pfam DUF761-associated sequence motif 121 147 IPR032795 -
Sebi462g00048 1014 MobiDBLite consensus disorder prediction 495 599 - -
Sebi462g00048 1014 MobiDBLite consensus disorder prediction 543 561 - -
Sebi462g00048 1014 MobiDBLite consensus disorder prediction 571 587 - -
Sebi462g00048 1014 Pfam Domain of unknown function (DUF4378) 840 999 IPR025486 -
Sebi462g00048 1014 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 38 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi462g00048 Sebi-Chr462 676106 680980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi462g00048 25 1004 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 31.710 6.03e-90 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi462g00048 - - aprc:113861902 1394.79