Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi462g00030 ATGCGGATGAGCTGTAACGGATGCCGGGTACTCAGAAAAGGTTGCAGTGAGAATTGCAGCATAAGACCCTGTTTACAGTGGATCAAGAGCCCAGAATCCCAAGCCAATGCCACTGTCTTTCTTGCTAAGTTCTATGGCCGTGCTGGCCTCATGAACCTTGTCAACGCCGGCCCCGAGCATCTCCGTCCAGCGATTTTTCGTTCATTGCTGTACGAAGCATGCGGTCGGATAGTGAACCCGATTTACGGTTCGGTCGGTTTGTTGTGGTCGGGGAGCTGGCAGCTTTGTCAAGCCGCCGTCGAAGCCGTTTTGAAAGGCGCGCCAATCACGCCGATCACATCTGAAGCCGCGGCTAATGGGCGGGGCCCACCACTCAAGGCATACGACATACGCCACGTGTCCAAGGACGAGAACTCCGCTGCCGCGTCAAATGAAACTCACCAACGAGTCAAGACTCGGTCCCGTGTCAAGCGAACCGTCGCTGGCAAGCCAAAAGTAACCGCCAACGAGGAAAAAACTAAAACCAATAAGGGAACGGAATTGGGTTCGGCTGGACCGGATTCCGTACGGGATGCTGGAGTGGTTGCATGGACCGGGTGTTGCGCGACCGAAGAGGTGTTGAACCGGTCTGGGAGTCATGATCACGAGTCCTCGCTTAGCCACCAGTCAGAGGCGGCGAATGCGGTGGAGGGAGAGAGCAAAGAGAGCGAGAGCATGGTTTCGGTGGAGACCGCGGAGACTTCGATTCTCTTCCGTGATGAACCGGAGTCGAACCCAAAGCGAAGTGACCGAACCGATAAGAGTGGTGGGTATCATGTTGGTCTAGAGCTGACGCTTGGGCTTGAACCGCTCTCACGTGCGGATCACGTGGTTCCGGTTAAGAAGAGAAGGGTTGAATTGTTGAAGGATTGTGGTGGTTCGGCTGACAATGGCTCATGCAAGATGGATCTGGGGCTTGCTTGA 963 0.5514 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVSKDENSAAASNETHQRVKTRSRVKRTVAGKPKVTANEEKTKTNKGTELGSAGPDSVRDAGVVAWTGCCATEEVLNRSGSHDHESSLSHQSEAANAVEGESKESESMVSVETAETSILFRDEPESNPKRSDRTDKSGGYHVGLELTLGLEPLSRADHVVPVKKRRVELLKDCGGSADNGSCKMDLGLA 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi462g00030 320 MobiDBLite consensus disorder prediction 136 189 - -
Sebi462g00030 320 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Sebi462g00030 320 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 279 - -
Sebi462g00030 320 PIRSF AS2 1 319 IPR017414 -
Sebi462g00030 320 MobiDBLite consensus disorder prediction 249 270 - -
Sebi462g00030 320 MobiDBLite consensus disorder prediction 209 271 - -
Sebi462g00030 320 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi462g00030 Sebi-Chr462 463375 464580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi462g00030 1 319 AS2 family AT3G02550 54.969 1.84e-108 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi462g00030 LOB 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi462g00030 - - lja:Lj1g3v3317390.1 466.848