Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi461g00028 ATGTCTGGAAAGGGGAAGAAGAGGGAGGAGCATGACTGCGCTTCCGATGGCGACTCCGAAGGCCACGCGCCTCCCAAAAAGTCCCTCAAAAGAGATTCCGATGACGACCCCGACTCCATCGTTGTCTGCGAGATTTCAAAGAACAGGAGGGTTTCCGTGAGGAATTGGCAGGGCAGGATTGTGGTTGACATTCGCGAGTTTTACGTCAAAGATGGCAAGCAAATGCCAGGCAAAAAAGGTTTTTCAATCCTTCGTTTTAGTTTGTGA 267 0.5019 MSGKGKKREEHDCASDGDSEGHAPPKKSLKRDSDDDPDSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGFSILRFSL 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi461g00028 88 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 20 82 IPR045125 GO:0003713|GO:0060261
Sebi461g00028 88 SUPERFAMILY ssDNA-binding transcriptional regulator domain 42 83 IPR009044 GO:0003677|GO:0006355
Sebi461g00028 88 Gene3D Transcriptional Coactivator Pc4; Chain A 30 85 IPR009044 GO:0003677|GO:0006355
Sebi461g00028 88 Pfam Transcriptional Coactivator p15 (PC4) 43 83 IPR003173 GO:0003677|GO:0006355
Sebi461g00028 88 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi461g00028 Sebi-Chr461 386810 387191 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Sebi461g00028 PC4 4.8e-17 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi461g00028 K25815 - gmx:100820368 138.272