Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi461g00015 ATGAACAACAAAACCAACCGTAAACGGCAGGCGCCACCGCCGCCGCAACCCTCACCGGCGAGGCAGGCCCTCTCCCAGGATGAAGAGTTCGTCGACGAAGACGTCTTCCTGGACGAAACCCTCGTTTCTGAAGACGAAGAGTCCCTCATCCTCCGTGATATCGAGCAGCGGCAGGCCCTCGCCTCTCGTCTCTCCAAGTGGACTCGTCCTCCTCTTTCCTCTGAGTACCTCTCGCAATCTCGTAGTGTCCTTTTTCAGCAGCTGGAGATTGATTATGTAATTGGAGAGAGTCATAAAGAATTGCTGCCGAACTCTTCTGGACCTGCTGCCATTATTAGAATATTTGGAGTTACGAAGGAAGGACATAGTGTTTGCTGTAAAGTTCATGGGTTTGAACCATATTTCTACATCAGCTGTCCTCCTGGAATGGGTCCAGATGATATCTCTCATTTTCATCAAATTCTTGAGGGAAGGATGAGAGAAGCCAATAGAAACAATAACGTGGGAAAATTTGTTCGCCGTATTGAAATGGTGCAGAGAAGGAGTATTATGTACTATCAGCAGTCAAATTCCCATCCTTTTCTCAAAGTTGTAGTTGCACTCCCAACAATGGTTGCCAGCTGCCGTGGTAAACTTTGA 639 0.4773 MNNKTNRKRQAPPPPQPSPARQALSQDEEFVDEDVFLDETLVSEDEESLILRDIEQRQALASRLSKWTRPPLSSEYLSQSRSVLFQQLEIDYVIGESHKELLPNSSGPAAIIRIFGVTKEGHSVCCKVHGFEPYFYISCPPGMGPDDISHFHQILEGRMREANRNNNVGKFVRRIEMVQRRSIMYYQQSNSHPFLKVVVALPTMVASCRGKL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi461g00015 212 Gene3D DNA Polymerase, chain B, domain 1 88 212 - -
Sebi461g00015 212 MobiDBLite consensus disorder prediction 1 26 - -
Sebi461g00015 212 Pfam DNA polymerase family B, exonuclease domain 118 212 IPR006133 -
Sebi461g00015 212 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 68 212 - -
Sebi461g00015 212 SUPERFAMILY Ribonuclease H-like 109 211 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi461g00015 Sebi-Chr461 216111 218472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi461g00015 8 212 Core DNA Replication Machinery Family AT5G63960 70.531 1.49e-93 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi461g00015 K02327 - gmx:100817379 358.992