Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi460g00049 ATGAGCATTAAATGTGAGGATAATGCAGTGTCAGAGCTTAAAATTATGGGTGATAAATCTGTGAGGGCATCTTGGTTCAATGGATTTGCAGTTCCCAATCAGACACTATCCGTGAATTTCTCTATTGATTCTTTTTTCACCACATTGACAAAGTTGACCAGCTTAAGGGTTCTCAGTTTGGTTTCCTTAGGGCTTTGGGGGCCACTCCCTGATAAGGTTCACCTCTTCTCTTTGCTTGAAGTTTTGGACTTGAGCTCAAATTTCTTATTTGGTGCTATCCCACCAAAAATATCAACTATGCCTCAGCAGAGAGGGTCTTATTGTAAAGAATCCAATTCAGGATGGATGAAATTCAAGGCATGGAAAGTAGCTGTAGCAGTGGCCATTATTTTTGGACTTGTTATTGTAATTTTGGTGTCTGGAGTTTTCTTATGTAAAAGATATCATTTGAGAAAGACAACTAGGCAGGATGTGTTGCTAAAGATTGTCCAAGATAACTCAACAACTGGGGTTTCATCTGAAATCCTTGCAAATGCCAGATTCATTTCTCAAACAGTGAAGCTAGGGGCACAAACTACTCCAATCTGTCGACAATTTTCAGTAGAAGAGTTGAAGGAAGCCACAAGAAACTTTGATTTGTCAACTTATATTGGTGAAGGCTCCATAGGGAAGCTGTACAAAGGTAAACTAGAGAATGGATCTTATGTGGTGATACGATCTTTGGCTCTATCAAAGAAATGCTCAATTCAAAATCTTAAAGCAAGGTTGGATTTACTGTCAAAGCTTCAACACCCAAATTTGGTTAGCCTTTTGGGTCATTGCATTGATGTTGGTGGACAAGATGACTCCAGCAACCACAAACTTCATCTTATATATGAGTATGTGCCAAATGGGAATTATCATACCCATCTATCAGAATTTTCTACAGAGAAGGCACTTAAATGGTCTGATAGATTGACAATTTTAATTGGAGTTGCAAAGGCAGTGCATTTCTTACATACTGGTGTTATACCTGGCTGTTTTAATAACCAACTAAGGACAAATAATATCTTACTTGATGAACACCGCATTCCAAAATTGAGTGACTATGGTATGTCCATCATCACAGAAGAAATTGAAAAGTTTGAGGCAAAGGGTGAGAAGCCAAAATCATGTCAAAAGACAAAAATGGATAACGATGTCTATAATTTCGGATTCATATTGTTTGAATCACTTGTTGGACCTATAGCATGCGACAAAGAATGGAAGAATGGTGATTCTGCATCAGGTTCTACCAATCTTGTTGCCCCTTCACTTGGTTCAGTTATAGGTGAAGGAAGAATAGAGTTTGATGAGTCATTTAAACTTCCTGTAACTTTGTTGAGGGATATGTCAGTTAGAGGTGGTGATGCTGATGTATTCCAAAAGAATTGCTTGGAGTTCAACTTGTATGAGCCTAGAAGAGATAAGACTGTTAAAGGTCAATTATTGGCTACTGCCATTGTAGACTTGGCAGATTATGGGATACTCAAAGAAGCCTTGAGCATTAGTACACCTATGAACTGCAAGAGGAGCTACAGAAACACAGATCAGCCACTTTTGTTCATTAAAATTCAGCCTGTTGTTGAAAAGAATCGCACTAATTCTTCATTGAAGGATAGCTTTTCAAAGGAGGATTTGAAGAACAATAATGGTGGTGACTCTGTATCAGCACTGATGAATGAGGAATATGCTGAGGAAGCTGAGATTGCCTCTTTCACTGATGATGATGTGTCCTCACATTCATCTGCAGCAGCAGGTTCTACTTCCTTAGAATCCAGTGGGTTTACACCTGCTGCATTGGAAAAGAATGACAAGGAACATCCCCTGGCTACAGAAACAAGGCTTGAAAACATTAATGCAGTGCAACAAGATACATTTAAGAAGCTTGAGAGTTCATCTTACATGTCATCCATGGATGTATCTTCTGCTGTCAGGAGTAAAGTAAACAGTCATGCTTCTTTGTCTAAATCTCCTAATCACAACTCATTGTCAACTGAAACAAATGTTGCTTCACCTAGTGCTGATTCTTCTTCCTCATCTCCAGTTTTTGACAATTTAGATGTAAATTCTAGGGGCAGGACAAGAAGCAGTGATCATGAAAATTTGTATGAAAAGGTTACTAGTACTAGAAATATAGTTGCAGATGTTCAAAGAGACAGTAACCAAAGTACATTCAGCATCTATTCAAGGCACAAATCATCTCAAGATAATAGTCACTTCATTGGCAAGGATCTTGGCTCTGTAAACTGTGATACTTCTAAATGTCATGACAAATTAAATGGGAGATATAATGAAGAGGAAAAATATTCTGTGAAGGAGGGAGGAGGTGATAAAATTTACTATGGTTCTGTTGAGGATATACATGGAAATGAAAAATCTAATTTAGATAGGCAAAACTGCTCAGAAGATGAACAATCAGTAGCACAAGGTGCCAAAGACCAAGTCTTATTGGGTAGCACTACATATTCTTTTGGTGGGTCAAACAATGGTATGCAGGGAAATATTCTCAAAAGTGAAAGATTGAAGGACATGAAGTCTTTGAGAACACCAGCAGACTCAGCTAGGAATACTGGATTGCTTGGTAGCAACCATCATGCTGAAGTAGACCAAAATGGCATTCCTGGAGATGCACAGAACAGTGGAGGGACTATCAGAAGCAATGACAAAAGAGATGCTAAGATTTATCCAAAGGAAGCAAGAAATGCTAATTTAGATGGTAAAATTGAGCATTTGGAAAAGAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGCTATTGAGGCTGCTTTATATTCAGTAGTTGCTGAGCATGGAAACTCCATGAGTAAGGTCCATGCCCCAGCTCGGCGCCTTTCCAGGTTGTATCTTCATGCTTGTAAAGAAAATCTTCCAGGAAGAAGATCTGGGGCAGCTAAAAGTTCTGTTTCAGGATTAGTACTTGTTACAAAGGCATGTGGAAATGATGTCCCAAGGTTGACCTTTTGGTTGTCTAATACTGTAATGTTGAGAACAATTATAAGCCGAACCACAAAAAATTTGGTTCCATCAAATCCTGCTGGGTCTAGTAGGAGAAGGAAAACTGAGGGAGAGGGACATGCCAAGATATCATCCTCACAAAGGTGGAACAGATCCTACCATGGAAAAAATGAAAATACAGCATTAGGGTATGAATGTTTTGGTAACTGGGATGATCCTCATGTATTCTCATCAGCACTGGAAATGGTGGAAGCTTGGATCTTCTCTCGCATTGTTGAATCTATCTGGTGGCAGACTCTAACTCCACATATGCAACCTGTTGATACAAAGTTGAACAACAAGGAAGTGGGATATGCCTCAAGGAAAACCTATAGAAGAATATATAGTTCATGTGATCAAGAGCAGGGTAACTTGTCACTAGTTATTTGGAAGAATGCTTTTAGGGAAGCCTGTGAAAGGCTCTGTCCTATTCGAGCTGGAGGCCATGAGTGTGGCTGTCTGCCTATGCTACCTAGATTGATAATGGAGCAGTGTGTGGCGAGATTAGATGTGGCTATGTTCAATGCTATTCTTCGCGAGTCTGCTGATGAAATCCCAACTGATCCTGTATCTGATCCTATTAGTGATCCCAAGGTTGTCCCCATTCCACCTGGTAAATCAAGTTTTGGAGCCGGTGCTCAGCTAAAAACTGTGATTGGGAACTGGTCTAGATGGTTGACTGACCTATTTGGCATGGATGAGGATGATTCACTGGGAGATAAAGATGACCTTAAAAACAATGATGAGAGACAAAATACATCCTTCAAGTCCTTCAGACTTCTTAATGCACTAAGTGACCTCTTGATGCTTCCTAAGGATATGCTGTTAAATGCATCCATCAGGAATGAGGTATGCCCCATGTTTAATGCATCACTTATCAAGAAGATTCTTGACAATTTTGTCCCAGATGAGTTTTGCCCTGACCCTGTTCCTGCTGTTGTTTTTGAAGCTTTGGACTCAGAGAATGATATGGAGGATGGGAAGAAGTCTGTGAACAATTTCCCATGCATTGCAGCTTCTATTGTGTATTCACCTCCACCAGCAATTTCCATTGCAAGCATTGTTGGGGAGATGGGAAGCAAATCTCAGCTAAGAAGAAGCAGATCTTCTGTTGTTAGGAAATCATACACCAGTGATGATGAGCTTGATGAATTGAAGTCCCCATTATCTTCAATATTCTTCAGTGGTTCCCCTTCCTCAGCAGTTTCAACAAAACCAAGCTTGAAGTCCAAGGAAATTCGCAATGATTCTCCTGTTAGATATGAACTCCTCAGGAATGTGTGGATGAACAGCGAGTAG 4341 0.3976 MSIKCEDNAVSELKIMGDKSVRASWFNGFAVPNQTLSVNFSIDSFFTTLTKLTSLRVLSLVSLGLWGPLPDKVHLFSLLEVLDLSSNFLFGAIPPKISTMPQQRGSYCKESNSGWMKFKAWKVAVAVAIIFGLVIVILVSGVFLCKRYHLRKTTRQDVLLKIVQDNSTTGVSSEILANARFISQTVKLGAQTTPICRQFSVEELKEATRNFDLSTYIGEGSIGKLYKGKLENGSYVVIRSLALSKKCSIQNLKARLDLLSKLQHPNLVSLLGHCIDVGGQDDSSNHKLHLIYEYVPNGNYHTHLSEFSTEKALKWSDRLTILIGVAKAVHFLHTGVIPGCFNNQLRTNNILLDEHRIPKLSDYGMSIITEEIEKFEAKGEKPKSCQKTKMDNDVYNFGFILFESLVGPIACDKEWKNGDSASGSTNLVAPSLGSVIGEGRIEFDESFKLPVTLLRDMSVRGGDADVFQKNCLEFNLYEPRRDKTVKGQLLATAIVDLADYGILKEALSISTPMNCKRSYRNTDQPLLFIKIQPVVEKNRTNSSLKDSFSKEDLKNNNGGDSVSALMNEEYAEEAEIASFTDDDVSSHSSAAAGSTSLESSGFTPAALEKNDKEHPLATETRLENINAVQQDTFKKLESSSYMSSMDVSSAVRSKVNSHASLSKSPNHNSLSTETNVASPSADSSSSSPVFDNLDVNSRGRTRSSDHENLYEKVTSTRNIVADVQRDSNQSTFSIYSRHKSSQDNSHFIGKDLGSVNCDTSKCHDKLNGRYNEEEKYSVKEGGGDKIYYGSVEDIHGNEKSNLDRQNCSEDEQSVAQGAKDQVLLGSTTYSFGGSNNGMQGNILKSERLKDMKSLRTPADSARNTGLLGSNHHAEVDQNGIPGDAQNSGGTIRSNDKRDAKIYPKEARNANLDGKIEHLEKKIKMLEGELREAAAIEAALYSVVAEHGNSMSKVHAPARRLSRLYLHACKENLPGRRSGAAKSSVSGLVLVTKACGNDVPRLTFWLSNTVMLRTIISRTTKNLVPSNPAGSSRRRKTEGEGHAKISSSQRWNRSYHGKNENTALGYECFGNWDDPHVFSSALEMVEAWIFSRIVESIWWQTLTPHMQPVDTKLNNKEVGYASRKTYRRIYSSCDQEQGNLSLVIWKNAFREACERLCPIRAGGHECGCLPMLPRLIMEQCVARLDVAMFNAILRESADEIPTDPVSDPISDPKVVPIPPGKSSFGAGAQLKTVIGNWSRWLTDLFGMDEDDSLGDKDDLKNNDERQNTSFKSFRLLNALSDLLMLPKDMLLNASIRNEVCPMFNASLIKKILDNFVPDEFCPDPVPAVVFEALDSENDMEDGKKSVNNFPCIAASIVYSPPPAISIASIVGEMGSKSQLRRSRSSVVRKSYTSDDELDELKSPLSSIFFSGSPSSAVSTKPSLKSKEIRNDSPVRYELLRNVWMNSE 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi460g00049 1446 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 174 294 - -
Sebi460g00049 1446 ProSiteProfiles Protein kinase domain profile. 211 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi460g00049 1446 MobiDBLite consensus disorder prediction 1022 1053 - -
Sebi460g00049 1446 MobiDBLite consensus disorder prediction 656 697 - -
Sebi460g00049 1446 Gene3D Phosphorylase Kinase; domain 1 173 294 - -
Sebi460g00049 1446 MobiDBLite consensus disorder prediction 861 901 - -
Sebi460g00049 1446 SUPERFAMILY Protein kinase-like (PK-like) 192 409 IPR011009 -
Sebi460g00049 1446 MobiDBLite consensus disorder prediction 540 562 - -
Sebi460g00049 1446 MobiDBLite consensus disorder prediction 580 602 - -
Sebi460g00049 1446 Pfam Protein tyrosine and serine/threonine kinase 213 403 IPR001245 GO:0004672|GO:0006468
Sebi460g00049 1446 Gene3D Ribonuclease Inhibitor 1 107 IPR032675 -
Sebi460g00049 1446 SUPERFAMILY L domain-like 37 101 - -
Sebi460g00049 1446 Gene3D Transferase(Phosphotransferase) domain 1 295 438 - -
Sebi460g00049 1446 Coils Coil 908 935 - -
Sebi460g00049 1446 MobiDBLite consensus disorder prediction 581 602 - -
Sebi460g00049 1446 MobiDBLite consensus disorder prediction 656 711 - -
Sebi460g00049 1446 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 431 665 IPR021827 GO:0005643
Sebi460g00049 1446 SMART serkin_6 211 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi460g00049 1446 ProSiteProfiles C2 NT-type domain profile. 375 535 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi460g00049 Sebi-Chr460 583524 603142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi460g00049 49 413 Miscellaneous Gene Families AT5G14210 48.346 4.88e-101 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Sebi460g00049 PK_Tyr_Ser-Thr 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi460g00049 - - gmx:100818584 1381.31