Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi460g00040 ATGGCTGGAGGTGTTATCCAACAATTACTGAGGAGAAAACTCCAATCTCATTCTCCGAGTTATTCTTTGTCATCCATTGTCACAAAGAAAGACGGTGCTGGCTCTACTGGCAGCAGCTCCTTAAGAGCCCTTGCGCTAATTGGAGCTGGTGTCTCTGGTTTATTGGGTTTTGCGACAACAGCATCAGCTGATGAAGCTGAGCATGGCCTGGCATGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATCAACAAGTCTGTGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTATACGGAAGAAGAGGTAAAAGCGATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCTTTCCTGAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTACCAAAGTATACTGGAAATATATTTACCCTTTGTATTTTCAGGCTCGTCACAATGGTCAAAACTATGTGTTTGCCCTTCTAACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGAAGGACTGCACTATAATCCTTACTTTCCTGGTGGGGCCATTGCCATGCCTAAAATGCTTAATGATGGCGCTGTTGAGTATGAAGATGGTACCCCTGCTACAGAATCCCAGATGGGGAAAGATATTGTGTCATTCTTGTCTTGGGCGGCCGAACCTGAGATGGAAGAGAGAAAACTGGACATTGCTACTACATGCAGATGGGATTTAAATGGATATTTGTACTCTCACTGGCATTACTTCAAGCTGCCTATTATCGTCGCCTTCGGTGGTCTGTTCTAA 942 0.4522 MAGGVIQQLLRRKLQSHSPSYSLSSIVTKKDGAGSTGSSSLRALALIGAGVSGLLGFATTASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPEPYANEAAARFANGGAYPPDLSLITKVYWKYIYPLYFQARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDIVSFLSWAAEPEMEERKLDIATTCRWDLNGYLYSHWHYFKLPIIVAFGGLF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi460g00040 313 ProSiteProfiles Cytochrome c family profile. 89 189 IPR009056 GO:0009055|GO:0020037
Sebi460g00040 313 PANTHER CYTOCHROME C1 32 281 IPR002326 GO:0009055|GO:0020037
Sebi460g00040 313 FunFam Cytochrome c1, heme protein 66 273 - -
Sebi460g00040 313 Pfam Cytochrome C1 family 77 280 IPR002326 GO:0009055|GO:0020037
Sebi460g00040 313 SUPERFAMILY Cytochrome c 70 272 IPR036909 GO:0009055|GO:0020037
Sebi460g00040 313 PRINTS Cytochrome C1 signature 140 160 IPR002326 GO:0009055|GO:0020037
Sebi460g00040 313 PRINTS Cytochrome C1 signature 223 234 IPR002326 GO:0009055|GO:0020037
Sebi460g00040 313 PRINTS Cytochrome C1 signature 234 253 IPR002326 GO:0009055|GO:0020037
Sebi460g00040 313 PRINTS Cytochrome C1 signature 95 114 IPR002326 GO:0009055|GO:0020037
Sebi460g00040 313 PRINTS Cytochrome C1 signature 254 273 IPR002326 GO:0009055|GO:0020037
Sebi460g00040 313 PRINTS Cytochrome C1 signature 75 94 IPR002326 GO:0009055|GO:0020037
Sebi460g00040 313 PRINTS Cytochrome C1 signature 173 197 IPR002326 GO:0009055|GO:0020037
Sebi460g00040 313 Gene3D - 66 273 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi460g00040 Sebi-Chr460 459485 466060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi460g00040 1 280 Chloroplast and Mitochondria Gene Families AT3G27240 81.071 4.60e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi460g00040 K00413 - gmx:100803087 495.352