Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi460g00031 ATGAATGAAAGATTTGGACGAGAGATTCGTGTTTTTCAAACATCTTCACTTTCTCCGTCACCAAATGCTGCAGCAAACAATGAAGAGGAGACTGATGACTTCTATGAGTTTACTGCTGAAGACTATCACAGACTTTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAAGCAGCTCGTAGGTCAAGAATAACCAAAGCTGTAATTAGAGTTCGCTTCCCTGATAATCACACATTGGAGGCTACCTTTCACCCATCAGAAACAATCGCGAGTTTAATTAATCTCCTCGCTAAAGTGATTGCACAACCAGAGCAGCCATTTTATATATATACTACTCCACCTAAGAAGCTGATCAAAGACACGTCTCAGGATTTCTATACTGCTGGATTTTGTCCTGGTGCCATTGTGTACTTCTCATACAATGTTCCAAAAGGTGATAGCACTTCGGATGGTCCTGTTGGCCCTTACCTACTCGAAGAGGTAATGTCCTTGAAGGGTTTGGATGTTGCTAATGATCAAGGTCAGCCCTCAGATCCTGTACCGGCTGCACCAGTGCCTGCTGAGGCAACACAACTTCCTGCTGTTGAAGAACGTAAACCTGCTGAGAAAAAGCTTGTTAAACCAAAGTGGCTGAAAATGTGA 666 0.4249 MNERFGREIRVFQTSSLSPSPNAAANNEEETDDFYEFTAEDYHRLLATKKEDKFLKTRKIREAEEAARRSRITKAVIRVRFPDNHTLEATFHPSETIASLINLLAKVIAQPEQPFYIYTTPPKKLIKDTSQDFYTAGFCPGAIVYFSYNVPKGDSTSDGPVGPYLLEEVMSLKGLDVANDQGQPSDPVPAAPVPAEATQLPAVEERKPAEKKLVKPKWLKM 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi460g00031 221 MobiDBLite consensus disorder prediction 177 221 - -
Sebi460g00031 221 Pfam UBX domain 73 141 IPR001012 GO:0005515
Sebi460g00031 221 SUPERFAMILY Ubiquitin-like 48 146 IPR029071 -
Sebi460g00031 221 CDD UBX2_UBXN9 75 148 - -
Sebi460g00031 221 MobiDBLite consensus disorder prediction 203 221 - -
Sebi460g00031 221 ProSiteProfiles UBX domain profile. 70 146 IPR001012 GO:0005515
Sebi460g00031 221 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 2 221 IPR044232 GO:0032984|GO:0051117
Sebi460g00031 221 Gene3D - 7 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi460g00031 Sebi-Chr460 339686 342516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi460g00031 3 100 C2H2 Transcription Factor Family AT2G01650 36.275 2.53e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi460g00031 K15627 - gmx:100818386 318.546