Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi460g00025 | ATGGGAAGACAGCCATGTTGTGATAAGGTTGGTTTGAAGAGAGGTCCATGGACAATTGAGGAAGATCATAAGCTCATGAATTTCATCCTCAACAATGGCATCCACTGCTGGCGAACAGTTCCTAAGCTTGCAGGACTTCTAAGATGTGGAAAGAGCTGCAGATTGAGATGGATTAATTATCTGAGGCCAGACCTCAAGAGAGGTGGCTTTACAGAAATGGAAGAGGATCAAATTATACAACTACATTCATGTCTTGGTAACAGGTGGTCTAAGATTGCTGCACATTTTCCAGGGAGGACAGACAATGAAATCAAGAACCATTGGAACACAAAAATCAAGAAGAGGTTGAAGCTCCTTGGTCTGGATCCTGTGACCCTGAAGCCAATTGAGCAAAAGGAACAGTCTGATGATGACAAAAATAAGAGAGACATACAGCCAATTACTTCAAAAAGGCCTGAAGGTGTGGAGAATAATTCCTTGGACATTCATCATGGCAGAGAAGAAATGCCAAAAACAGAAGGGAGAAGAGAGGAAGATAAGGTGATTTGGGATGATACCTCCTCAGGATTTTTAAACAATTATGAAATGCTATGCTCACAGTTGGACTTGGGATCATGGATGAGTCAAGAAACCAAAACCAGTACTAGTTCTTACTGTAGTTCTTCTTTCTCTCTGGATGATTCTACCAACCTTTCTGTGGGTGAATCCCCTTGCCTTAAGGATAATTCATTACAACAATGGGTTGATGGTTTGGATTCCATTCTCTCATGGGATAGCTTCAATCCTCTTGAAAAAGATTTTTATCTTCTTGGAAAATAA | 819 | 0.4066 | MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIHCWRTVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHSCLGNRWSKIAAHFPGRTDNEIKNHWNTKIKKRLKLLGLDPVTLKPIEQKEQSDDDKNKRDIQPITSKRPEGVENNSLDIHHGREEMPKTEGRREEDKVIWDDTSSGFLNNYEMLCSQLDLGSWMSQETKTSTSSYCSSSFSLDDSTNLSVGESPCLKDNSLQQWVDGLDSILSWDSFNPLEKDFYLLGK | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi460g00025 | 272 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Sebi460g00025 | 272 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Sebi460g00025 | 272 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Sebi460g00025 | 272 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 1 | 221 | - | - | |
Sebi460g00025 | 272 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Sebi460g00025 | 272 | FunFam | MYB transcription factor | 11 | 67 | - | - | |
Sebi460g00025 | 272 | FunFam | MYB transcription factor | 68 | 129 | - | - | |
Sebi460g00025 | 272 | SMART | sant | 66 | 114 | IPR001005 | - | |
Sebi460g00025 | 272 | SMART | sant | 13 | 63 | IPR001005 | - | |
Sebi460g00025 | 272 | Gene3D | - | 11 | 67 | - | - | |
Sebi460g00025 | 272 | MobiDBLite | consensus disorder prediction | 129 | 178 | - | - | |
Sebi460g00025 | 272 | CDD | SANT | 70 | 110 | IPR001005 | - | |
Sebi460g00025 | 272 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Sebi460g00025 | 272 | Pfam | Myb-like DNA-binding domain | 67 | 110 | IPR001005 | - | |
Sebi460g00025 | 272 | Gene3D | - | 69 | 147 | - | - | |
Sebi460g00025 | 272 | MobiDBLite | consensus disorder prediction | 156 | 178 | - | - | |
Sebi460g00025 | 272 | MobiDBLite | consensus disorder prediction | 129 | 149 | - | - | |
Sebi460g00025 | 272 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
Sebi460g00025 | 272 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi460g00025 | Sebi-Chr460 | 277603 | 279087 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi460g00025 | 1 | 153 | MYB Transcription Factor Family | AT5G16600 | 68.182 | 1.22e-73 | 226 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Sebi460g00025 | Myb_DNA-binding | 8.6e-12 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi460g00025 | K09422 | - | gmx:100819471 | 466.077 |