Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi460g00020 ATGGAGGATATTGAACCTGATATAGAAAGGCACACCCAGGAAGATGATGCAGAAAGTGAATGTCCAATATCACTTCTGGAGAGTCAGAACCCCAAGGATTCCGCTGTTGCAGACAGTAACAAGGTCATTGACAAAGAGAATCAGTGTACAAGCCCAAATAACTGTCCTGTTGGCATCGATGAATGTCAGACCTCAAATATTTCCCATGATGACAAATTACATAATGATGTCTGTGATGAACAGCTGTGTCAGAACCCCAATGCTACATTTATATCAATGACCGATACTGATGTAGAAAATGAGGAATTATATGTGGCTCCAGAGATTGGAATGGAGTTTGAATCAGAAGATCATGCTTACAAGTGTTATAGCAACTATGCTGTTCTCAATGGTTTCAGCATAAGAAAGGATTTTGTCAACAAAAGTAAGATAGATGGTGCAGTGGTGTCCAGAAGATACACCTGCCACAGACAGGGTTATCGTCCTAACAGAAATGGTACATACATAAGGAAATTCCAGCACGAAACAAGGACTGGTTGCTTAGCACATATGACTATCGGTCGTCAGCCAAAGGGCAAGTTTCGTGTCACTAGTTTTGAAAGAGAGCACAATCATGAGTTTGTAACACCCTGTACTGCTCATATGTTACCATCACAGAAAAGATTGAGTTTTGCTCAAGCTGTTGAAGCGAACATAACTGAGTGCAGGTTGGATGGGGTACCAAAACTGGGAATGGGATTTGACTCAGAGGAGCATGCATATGAATTTTATAATACATATGCTGGACGTGTAGGTTTCAGTGTAAGAAAAGATTATGTAAATAGGAGTAAAGTTGATGGAGCTGTAGCATCTAGAAGGTTTACTTGCTTCAGAGAAGGTTTTCGGCAGAAGGACAAGCGGGATATGAATGTAAAGAGACCTCGGAAGGAAACACGGATTGGGTGTTTGGCACAATTGGTTATTTCTCGACAACCTGATGGTAGGTATCATGTAACTCACTTTGAAGAAAAGCATAATCATGAGCTTGTTGCTGCATGTAGAGCTCATATGTTAAGGTCACAGAAGAGGTTAGCTGCAACCGAAGTTGAAAACAACCTTGAAGATGGACCCAATATGCTGCCTAAGTCAGCCTCTGAATCCAATTGCAGGACTGTTGAAGGTTTTCATGATCTGGATTATGATCCTCTGAAGCAATTAATTCCACATTACCTCAAACGAATCACCGAGTTTGTGCCTGGCATGTCTACCAAGATGCCCTCAAGCAACTGA 1269 0.4145 MEDIEPDIERHTQEDDAESECPISLLESQNPKDSAVADSNKVIDKENQCTSPNNCPVGIDECQTSNISHDDKLHNDVCDEQLCQNPNATFISMTDTDVENEELYVAPEIGMEFESEDHAYKCYSNYAVLNGFSIRKDFVNKSKIDGAVVSRRYTCHRQGYRPNRNGTYIRKFQHETRTGCLAHMTIGRQPKGKFRVTSFEREHNHEFVTPCTAHMLPSQKRLSFAQAVEANITECRLDGVPKLGMGFDSEEHAYEFYNTYAGRVGFSVRKDYVNRSKVDGAVASRRFTCFREGFRQKDKRDMNVKRPRKETRIGCLAQLVISRQPDGRYHVTHFEEKHNHELVAACRAHMLRSQKRLAATEVENNLEDGPNMLPKSASESNCRTVEGFHDLDYDPLKQLIPHYLKRITEFVPGMSTKMPSSN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi460g00020 422 MobiDBLite consensus disorder prediction 1 18 - -
Sebi460g00020 422 Pfam FAR1 DNA-binding domain 123 208 IPR004330 -
Sebi460g00020 422 Pfam FAR1 DNA-binding domain 255 343 IPR004330 -
Sebi460g00020 422 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 231 366 - -
Sebi460g00020 422 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi460g00020 Sebi-Chr460 206968 208657 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi460g00020 FAR1 6.4e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi460g00020 K17604 - gmx:102659753 623.239