Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi45g00129 ATGATGATAGGGTTTGGAGGAAACAGTTGCAGTGAGGTTTCTTCTATGGACATGAACATGATGAACATGGAAACTAATAGGAAGTTTCTTTCTTTACCTCTGAACAACAACAACAATTCTGGTCATCGCACTAGTGATGACAGAAGGGTATCTCTCTTGAGCAACTCTCAAAATCATAACAACTACAGCCATCACCATCACCAGCAGCAGGATCACCACAACACTGCCAGTGTTAGGGATAAAATCATGGCACATCCTCTCTTTCCTCGTCTCTTGTCCTCTTACCTTAATTGCCTCAAGGTTGGAGCACCTCCTGAAGTGGTAGCTAGCTTAGAGGAGTCATGTGCCAAATGTGAATCTCTGAATGGTGCATCATCAGGAGGAGGAAGAACAGGAAGTGGTTCTATAGGTGAAGATCCAGCACTTGACCAGTTCATGGAGGCTTATTGTGAGATGCTTATCAAGTATGAGCAAGAGCTCACAAAACCCTTCAAAGAAGCCATGCTTTTCTTTTCAAGAATTGAGTGTCAGCTTAAAGCTCTAGCAGTTTCAACAGACTTTGGTCAAAGTGAATCATCATCACAGAATGAGGTTGATGTGCATGATAACAACCTAGATACTCAAGTTGAAGATAGGGAACTAAAAGTCCAGCTTTTGCGTAAGTATAGTGGATATCTAGGAAGCCTCAAGAAGGAGTTTTTGAAGAAGAAAAAGAATGGAAAGTTGCCAAAGGAAGCTAGGCAGCAGCTACTTGATTGGTGGAACAGGCATTACAAATGGCCTTACCCATCGTGTGGAGTTTGGTTCCACTCTGAAGAACTCAAATTGAAGTTTGAAGGGTAA 843 0.4223 MMIGFGGNSCSEVSSMDMNMMNMETNRKFLSLPLNNNNNSGHRTSDDRRVSLLSNSQNHNNYSHHHHQQQDHHNTASVRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCESLNGASSGGGRTGSGSIGEDPALDQFMEAYCEMLIKYEQELTKPFKEAMLFFSRIECQLKALAVSTDFGQSESSSQNEVDVHDNNLDTQVEDRELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSCGVWFHSEELKLKFEG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi45g00129 280 SMART KNOX1_2 76 120 IPR005540 GO:0003677|GO:0005634
Sebi45g00129 280 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 126 264 - -
Sebi45g00129 280 Pfam KNOX2 domain 135 181 IPR005541 GO:0003677|GO:0005634
Sebi45g00129 280 SMART KNOX2_2 132 183 IPR005541 GO:0003677|GO:0005634
Sebi45g00129 280 SMART ELK_2 213 234 IPR005539 GO:0003677
Sebi45g00129 280 Gene3D - 231 276 - -
Sebi45g00129 280 ProSiteProfiles ELK domain profile. 213 233 IPR005539 GO:0003677
Sebi45g00129 280 MobiDBLite consensus disorder prediction 56 76 - -
Sebi45g00129 280 Pfam KNOX1 domain 78 119 IPR005540 GO:0003677|GO:0005634
Sebi45g00129 280 Pfam ELK domain 213 234 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi45g00129 Sebi-Chr45 2680625 2683428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi45g00129 78 264 Homeobox Transcription Factor Family AT1G62360 61.616 1.85e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi45g00129 - - gmx:100791704 390.193