Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi45g00129 | ATGATGATAGGGTTTGGAGGAAACAGTTGCAGTGAGGTTTCTTCTATGGACATGAACATGATGAACATGGAAACTAATAGGAAGTTTCTTTCTTTACCTCTGAACAACAACAACAATTCTGGTCATCGCACTAGTGATGACAGAAGGGTATCTCTCTTGAGCAACTCTCAAAATCATAACAACTACAGCCATCACCATCACCAGCAGCAGGATCACCACAACACTGCCAGTGTTAGGGATAAAATCATGGCACATCCTCTCTTTCCTCGTCTCTTGTCCTCTTACCTTAATTGCCTCAAGGTTGGAGCACCTCCTGAAGTGGTAGCTAGCTTAGAGGAGTCATGTGCCAAATGTGAATCTCTGAATGGTGCATCATCAGGAGGAGGAAGAACAGGAAGTGGTTCTATAGGTGAAGATCCAGCACTTGACCAGTTCATGGAGGCTTATTGTGAGATGCTTATCAAGTATGAGCAAGAGCTCACAAAACCCTTCAAAGAAGCCATGCTTTTCTTTTCAAGAATTGAGTGTCAGCTTAAAGCTCTAGCAGTTTCAACAGACTTTGGTCAAAGTGAATCATCATCACAGAATGAGGTTGATGTGCATGATAACAACCTAGATACTCAAGTTGAAGATAGGGAACTAAAAGTCCAGCTTTTGCGTAAGTATAGTGGATATCTAGGAAGCCTCAAGAAGGAGTTTTTGAAGAAGAAAAAGAATGGAAAGTTGCCAAAGGAAGCTAGGCAGCAGCTACTTGATTGGTGGAACAGGCATTACAAATGGCCTTACCCATCGTGTGGAGTTTGGTTCCACTCTGAAGAACTCAAATTGAAGTTTGAAGGGTAA | 843 | 0.4223 | MMIGFGGNSCSEVSSMDMNMMNMETNRKFLSLPLNNNNNSGHRTSDDRRVSLLSNSQNHNNYSHHHHQQQDHHNTASVRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCESLNGASSGGGRTGSGSIGEDPALDQFMEAYCEMLIKYEQELTKPFKEAMLFFSRIECQLKALAVSTDFGQSESSSQNEVDVHDNNLDTQVEDRELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSCGVWFHSEELKLKFEG | 280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi45g00129 | 280 | SMART | KNOX1_2 | 76 | 120 | IPR005540 | GO:0003677|GO:0005634 | |
Sebi45g00129 | 280 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 126 | 264 | - | - | |
Sebi45g00129 | 280 | Pfam | KNOX2 domain | 135 | 181 | IPR005541 | GO:0003677|GO:0005634 | |
Sebi45g00129 | 280 | SMART | KNOX2_2 | 132 | 183 | IPR005541 | GO:0003677|GO:0005634 | |
Sebi45g00129 | 280 | SMART | ELK_2 | 213 | 234 | IPR005539 | GO:0003677 | |
Sebi45g00129 | 280 | Gene3D | - | 231 | 276 | - | - | |
Sebi45g00129 | 280 | ProSiteProfiles | ELK domain profile. | 213 | 233 | IPR005539 | GO:0003677 | |
Sebi45g00129 | 280 | MobiDBLite | consensus disorder prediction | 56 | 76 | - | - | |
Sebi45g00129 | 280 | Pfam | KNOX1 domain | 78 | 119 | IPR005540 | GO:0003677|GO:0005634 | |
Sebi45g00129 | 280 | Pfam | ELK domain | 213 | 234 | IPR005539 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi45g00129 | Sebi-Chr45 | 2680625 | 2683428 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi45g00129 | 78 | 264 | Homeobox Transcription Factor Family | AT1G62360 | 61.616 | 1.85e-70 | 220 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi45g00129 | - | - | gmx:100791704 | 390.193 |