Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi45g00122 ATGAAATCCGAGGTTCTTACAAAACCTGAAGATATTGTCAGTTACAACACAAACATCACAAACAACAAAGACACTGTACAATCCTTTACCAGGGTGAATGTTCCATTCCCTTGTGATTGCATCAATGGGGAGTTTCTAGGACATACATTCCAATACTCAATTGGGTCAGGAGACACCTATTTGTCTGTTGCCAATGGGAACTATTCCAATTTGACCACTGCTGAGTGGTTGCAGAGCTTCAACCACTATAAACCAAATGATATTCCAGATACTGGAACACTTAATGTCACCATTAACTGTTCCTGCGGGAGCAGTGATGTTTCTAAGGAGTATGGATTGTTCATCACATACCCTCTTAGACCTGAAGATTCTTTGCAGTCAATTGCTAACCAGACTAACCTTGAGCCTGAGTTGCTGCAGAAGTACAACCCTGGTGTGAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGAAAAGACCAAAATGGAAACATCGTGCCCTTTCGCCTAAGCACTGGAGGTTTGACCTTCTATCTCTGCAGAAAGTTGTCTTCCTTTGAGTTTGATAATAACATCAGACTCATGATGAGGTCTCTGGTGGTAATGCTACATATGGAAATTCAGATTTTGGCAGTCCTCCTGATGCTGCAGGTGGTTGCTAACACCATTGGTATTAGGGTGGACAAATCTGCGGAATTTTCATATGAAGAACTTGCCAATGCCACAAATAATTTCAGTATGACTAACAAAATTGGTCAAGGTGGTTTTGGAGAAGTCTATTATGCAGAGCTGAACGGCGAGAAAGCTGCAATAAAAAAGATGAACATGGATGCAGAAGGAGTATTTCTAGCTGAACTCAAAGTGTTGACACGTGTTCATCACTTGAACCTGGTACGCTTGATCGGATATTGCATTAAGGAATCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGGCAACATTTACGTAATTCAGATGGAAAACCATTGCCATGGTCTACCCGGGTTCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATACATTCATGAGCATACAGTTGCAGACTTTGGATTAACCAAGCTGATTGTTGGGAGTTCATCTATTCCCACTGCTAATATGGCAGGCACATTTGGTTACATGGCACCAGAATATGCATATGGCAGTGTTTCTCCCAAATTAGATGTCTATGCTTTTGGAGTTGTTCTTTGTGAGCTAATTTCAGGTAAAGAAGCTGTGATCAAGGGTGGTTTTGATGAAGTTTTTGATCAGCTAGATCCTCCAGAATGTCTTAAAAAACTGGTGGATCCTACACTTGGAGATAATTACTCAATTGATTCAGTTTTTAAGGTGGCACAAATTGCCAAAGCATGTACAGAGAGAGATCCACAACGACGTCCAAATATGAGCTCTGTTGTGGTTGCTCTTACCACACTTACTTCAAACACTGATGATTGGGACATTACTTCCATCTACCAAAATCCTGCTCTTGTAAATCTAATGTCTGGAAGATAG 1527 0.4073 MKSEVLTKPEDIVSYNTNITNNKDTVQSFTRVNVPFPCDCINGEFLGHTFQYSIGSGDTYLSVANGNYSNLTTAEWLQSFNHYKPNDIPDTGTLNVTINCSCGSSDVSKEYGLFITYPLRPEDSLQSIANQTNLEPELLQKYNPGVNFSQGSGLVYIPGKDQNGNIVPFRLSTGGLTFYLCRKLSSFEFDNNIRLMMRSLVVMLHMEIQILAVLLMLQVVANTIGIRVDKSAEFSYEELANATNNFSMTNKIGQGGFGEVYYAELNGEKAAIKKMNMDAEGVFLAELKVLTRVHHLNLVRLIGYCIKESLFLVYEYIENGNLRQHLRNSDGKPLPWSTRVQIALDSARGLEYIHEHTVADFGLTKLIVGSSSIPTANMAGTFGYMAPEYAYGSVSPKLDVYAFGVVLCELISGKEAVIKGGFDEVFDQLDPPECLKKLVDPTLGDNYSIDSVFKVAQIAKACTERDPQRRPNMSSVVVALTTLTSNTDDWDITSIYQNPALVNLMSGR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi45g00122 508 SUPERFAMILY Protein kinase-like (PK-like) 230 480 IPR011009 -
Sebi45g00122 508 Gene3D Transferase(Phosphotransferase) domain 1 317 498 - -
Sebi45g00122 508 ProSiteProfiles Protein kinase domain profile. 246 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00122 508 FunFam LysM receptor kinase 2 225 316 - -
Sebi45g00122 508 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 494 IPR044812 GO:0019199|GO:0045087
Sebi45g00122 508 Pfam Protein kinase domain 248 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00122 508 ProSitePatterns Protein kinases ATP-binding region signature. 252 274 IPR017441 GO:0005524
Sebi45g00122 508 Gene3D Phosphorylase Kinase; domain 1 219 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi45g00122 Sebi-Chr45 2565569 2570533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi45g00122 10 508 Receptor kinase-like Gene Family AT3G21630 52.313 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sebi45g00122 Pkinase 6.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi45g00122 - K13429 gmx:100803042 699.508