Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi45g00121 ATGGAATCCAGTGTTCTTTCAAAGCCTGAAGATATTGTGAGCTACAACAATGATTCTGTCACATTCGCCAGCAGGGTTAACATTCCATTCCCTTGTGATTGCATCAATGGTGAGTTTCTGGGTCACACGTTTCTCTACGAGCTTCAGCCAGGGGAGACCTATACAACAGTGGCTAACAAGACCTTTTCCAATTTGACAACTGATGTGTTGATGCAAAGCTTCAACATTTATCGACCAACAAATATTCCTGATTTTGGAATCCTTAATGTCACTGTTAACTGTTCCTGTGGGAACAGTGAGGTTTCTATGGATTATGGGTTGTTCATCACATACCCTCTTAGACCTGAGGACACTTTGCAGTCCATTGCAAACCAGACCAAGATTGAGGCTGAGTTGCTGCAAAGGTACAACCCGGGTGTGGATTTTAGCCAAGGAAGTGGTCTGGTTTTCATTCCAGGGAAAGACCAAAATGGTAGCTATGTGCCCCTTCACCCTAGCACAGGAGGTTTGATCTTCTCACTCCCTCAAAATGTTGGTCTAGCAGGTGGAGCTATTGCTGGAATATCTATAGGAGTAATAGCAGGGGTTTTATTATTGGCATTTTGTATGTATATTAAGTATCACCTAAAGAAGAAGGCACAATTGAAAAATTTGACCATGGATGATTCCACGGTGAACTCTGCTGGAGTTAGTAAAGATTTTGGTGGTCCTTCCGTTGATGGTGGTGCTGACATCACAGGCACTACGGTGGAAGAATCACAAGAGTTTTCATACAAAGAACTGGCCAATGCCACAAATAACTTCAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGGGTAGTATACTATGCAGAGCTGAGAGGGGAGAAAGCTGCTATCAAGAAGATGAATATGAAAGCAAAGAGAGAATTTCTTGCTGAATTGAAAGTCTTAACTCATGTTCATCACTTGAACCTGGTTGCAGATTGTGGATTGACAAAGCTGGCTGAAGTTGGAAATTCAACCACTTCAGCGAAGGGTACATTCGGTTACATGCCACCAGAGTATGATGAATTCTTTTTGTCTCTTCAAGTGATAGCTAACTTTGCCATAGGAGCTTGTTTGAGATATGTGTCAGGCAGGGTTTCTCCTTCTCCCAAGATAGATGTCTATGCCTTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAAGAAGCTGTAATCCAAGTTGGTGCTGAAGCAAAAGGCCTTGTAGCTTTGTTTAATGAAGTTTTTGATCACCAACCAGACCCAATGGAAGGTCTTAAAAATCTGGTGGATCCAAGGCTTGGAGATAACTACCCAATTGATTCAGTTTACAAGATGGCACAACTTGCCAAAGCTTGTACAGAGGGTGATCCACAACGACGTCCAACTATGAGATATATTGTGGTTGCTCTTATGACACTTACTTCAAACACTGAGGATTGGAATATTGCATCCTTCTATGAAAATCCAACCCTTGTTCCTCTCAGTGACCAAATGAAACTCAAAAATGGTTTACTCTTGTTCTTTCTGTTGCTTGAGTATGTTTGTTTCAAGGTGGAATCCAAGTGTGTGAAGGGGTGTGATTTAGCTTTAGCTTCTTACTATGTCATGCCTAATATTTTTCTAGAAGGCAATATAACACGCTTCATGAGATCAACAATTGTGTCCAATTCTGATGTTATTATCAGCTACAACAAAGGCAAAATATTCAATAATGATATTCTTCTAGCCTTTCTCAGACTCAACATTCCATTCCCATGTGACTGTATTGGTGGTGAATTTCTGGGGCATGTGTTTGAGTACACAACTGATGCAGGTGACACCTATAATTTAATTGCCAACAACTACTATGCTAATCTTACCACAGTAGAGCTTTTGAAAAGGTTCAATAGCTATGATCCAAATCATATACCTGCTAATGCCAAGATTAATGTCACTATCAATTGTTCTTGTGGGGACAGTCAGATTTCAGAAGATTATGGGTTGTTTGTTACCTATCCTCTCAGGACTGGGGATACACTGCAAGTTATTGCAAACCAAACTAGTCTTGATGCAGAGTTGCTGCAGAGTTATAATCCAAGTGTTAATTTCAGCAAAGGGAGTGGAATAGTTTTCATTCCAGGAAGAGATCAAAATGGAGACTATGTTCCTTTATACCCTAGGAAAACAGGTCTAGCTACAAGTGCTGCTGTTGGTATATCTATAGCAGGAATATGTGGCCTTCTATTATTGATAATTTGTATATATGCCAAATACTTCAAGAAGAAGGAAGAAGAGAAAGCTAAATTGCCAACAGAAGTTTCTGTGCCGCTTTCAACTCAAGATGGTAATGCTTCTAGTAGTGCAGAATATGAAACTTCAGGATCCTCTGGGCCTGCTCCTGGTAGTGTTGCTGGCCTTACAAGCATTATGGTGGCAAAATCAATGGAGTTTTCATATCAAGAACTAGCCAAAGCTACAAATAACTTCAGCTTGGAAAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTGAGAGGCGAGAAAACAGCAATTAAGAAGATGGACGTACAAGCATCAACAGAATTTCTGTGTGAGTTGAAGGTCTTAACACATGTTCATCACTTGAATTTGGTGCGCTTGATTGGATATTGCGTTGAGGGATCTCTATTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGTAAAGATCCATTACCATGGTCTAGCAGAGTGCAAATTGCTCTTGATTCAGCAAGAGGCCTTGAATACATTCATGAGCACACTGTGCCTGTGTATATCCACCGTGATGTAAAATCTGCAAATATATTGATAGACAAAAACTTTCGTGGAAAGGTTGCAGATTTTGGCTTGACCAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTATTCTGAAGACAGGTGAATCTGTTGTTGAATCAAAGGGTCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAAAGTGATCCTTTGGAAGGTCTTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATTGATTCTGTTCTCAAGATGGCCCAACTTGGGAGAGCTTGTACAAGAGATAACCCACTATTGCGCCCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTTTCATCACCTACTGAGGATTGTGATGATGATACTTCCTATGAAAATCAAACTCTCATAAATCTATTGTCAGTGAGATGA 3375 0.3994 MESSVLSKPEDIVSYNNDSVTFASRVNIPFPCDCINGEFLGHTFLYELQPGETYTTVANKTFSNLTTDVLMQSFNIYRPTNIPDFGILNVTVNCSCGNSEVSMDYGLFITYPLRPEDTLQSIANQTKIEAELLQRYNPGVDFSQGSGLVFIPGKDQNGSYVPLHPSTGGLIFSLPQNVGLAGGAIAGISIGVIAGVLLLAFCMYIKYHLKKKAQLKNLTMDDSTVNSAGVSKDFGGPSVDGGADITGTTVEESQEFSYKELANATNNFSMANKIGQGGFGVVYYAELRGEKAAIKKMNMKAKREFLAELKVLTHVHHLNLVADCGLTKLAEVGNSTTSAKGTFGYMPPEYDEFFLSLQVIANFAIGACLRYVSGRVSPSPKIDVYAFGVVLYELISAKEAVIQVGAEAKGLVALFNEVFDHQPDPMEGLKNLVDPRLGDNYPIDSVYKMAQLAKACTEGDPQRRPTMRYIVVALMTLTSNTEDWNIASFYENPTLVPLSDQMKLKNGLLLFFLLLEYVCFKVESKCVKGCDLALASYYVMPNIFLEGNITRFMRSTIVSNSDVIISYNKGKIFNNDILLAFLRLNIPFPCDCIGGEFLGHVFEYTTDAGDTYNLIANNYYANLTTVELLKRFNSYDPNHIPANAKINVTINCSCGDSQISEDYGLFVTYPLRTGDTLQVIANQTSLDAELLQSYNPSVNFSKGSGIVFIPGRDQNGDYVPLYPRKTGLATSAAVGISIAGICGLLLLIICIYAKYFKKKEEEKAKLPTEVSVPLSTQDGNASSSAEYETSGSSGPAPGSVAGLTSIMVAKSMEFSYQELAKATNNFSLENKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAILKTGESVVESKGLVALFEEALNQSDPLEGLRKLVDPRLGENYPIDSVLKMAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDCDDDTSYENQTLINLLSVR 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi45g00121 1124 FunFam LysM receptor kinase 2 805 896 - -
Sebi45g00121 1124 ProSitePatterns Protein kinases ATP-binding region signature. 274 296 IPR017441 GO:0005524
Sebi45g00121 1124 ProSiteProfiles Protein kinase domain profile. 826 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00121 1124 MobiDBLite consensus disorder prediction 767 796 - -
Sebi45g00121 1124 Gene3D Transferase(Phosphotransferase) domain 1 897 1119 - -
Sebi45g00121 1124 MobiDBLite consensus disorder prediction 770 796 - -
Sebi45g00121 1124 ProSitePatterns Protein kinases ATP-binding region signature. 832 854 IPR017441 GO:0005524
Sebi45g00121 1124 Coils Coil 284 304 - -
Sebi45g00121 1124 Pfam Protein tyrosine and serine/threonine kinase 827 1038 IPR001245 GO:0004672|GO:0006468
Sebi45g00121 1124 Pfam Protein tyrosine and serine/threonine kinase 270 327 IPR001245 GO:0004672|GO:0006468
Sebi45g00121 1124 Gene3D Phosphorylase Kinase; domain 1 243 324 - -
Sebi45g00121 1124 SUPERFAMILY Protein kinase-like (PK-like) 807 1096 IPR011009 -
Sebi45g00121 1124 ProSiteProfiles Protein kinase domain profile. 268 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00121 1124 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 508 1109 IPR044812 GO:0019199|GO:0045087
Sebi45g00121 1124 SMART serkin_6 826 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00121 1124 Pfam LysM domain 114 141 IPR018392 -
Sebi45g00121 1124 Gene3D Phosphorylase Kinase; domain 1 806 896 - -
Sebi45g00121 1124 SUPERFAMILY Protein kinase-like (PK-like) 257 488 IPR011009 -
Sebi45g00121 1124 Gene3D Transferase(Phosphotransferase) domain 1 325 494 - -
Sebi45g00121 1124 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Sebi45g00121 1124 FunFam PTI1-like tyrosine-protein kinase 3 897 1110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi45g00121 Sebi-Chr45 2547304 2557666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi45g00121 12 498 Receptor kinase-like Gene Family AT3G21630 40.636 2.76e-115 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sebi45g00121 PK_Tyr_Ser-Thr 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi45g00121 - K13429 gmx:100792559 972.615