Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi45g00097 ATGATTAGGAGTACCACTACCACACTTTTATTATTGGCTATTTCCTTCTTGTATGGTGCTTCTGCTCTGCTCTCTGATGGGGTGACCCTGTTGTCACTCTTGACAAGCTGGACCTTTGTTCCTTCTATCATCAGCTCAAGCTGGAATGCCTCTGATTCCATTCCATGTTCATGGGTTGGAGTTCAATGCGACCATGCCCACAATGTGATCTCTCTTAACCTCACTCATCAAGGGATTTTTGGTCAACTTGGACCACAAGTTGGAAACTTGTATCACTTGCAGACCTTTGTGTTGTTGGGTAATGGTTTCTCAGGAAAAGTACCCTCAGAGTTAAGCAACTGTAGTTTGCTCCAGTATTTAGACCTTTCTGGAAACAACTTCAGTGGACAGATACCATATAGCTTTAAGAAGTTGCAAAATTTACAGTATTTGAGCTTGTCTTCTAATCTGTTGACCGGTGAAATTCCAGTCAGTATTTGGAGAATTACAAGTCTTAAGCACATATTGGTTCACAACAACAGCCTCTTTGGGGAGCTACCTTTGGAGATGACAAAGCTCAAGCATCTAAAAAACATCTCATTGTTTGACAACCAGTTCTCCGGAGTCATACCTCAAAGCTTGGGAATCAACAGCAGCTTAGTGAAGTTGGACTGTATGAATAATAAGTTCACTGGTAATATCCCACCCAATCTTTGCTTTGGAAAGCAATTGATTGAGCTCAATATGGGAATTAATCAACTTCAAGGTGGCATACCTTCTGATGTAGGGAGATGTGCAACTCTAAGGAGGTTGATTCTCAAAGAAAATAATTTCACTGGGTCTCTTCCGGATTTTGAAAGTAATCCAAACCTCATATACATGGACATAAGCAAGAACAATATCAGTGGACTAATTCCATCAAGTTTGGGAAATTGCAGAAACCTCACTTACATTAATTTGTCAATGAACAATTTTACTGGGCCAACACCATCTCAGTTTGGAAAGCTTGTGAATCTTGTGATTTTGGATCTTGCTCACAACAACTTGGAAGGTACTTTGCCACCTCAGCTATCAAATTGTACTAAAATGGATCGTTTTGATGTGGGATTCAATTTCCTAAATGGTTCACTCCCATCAAGTTTGAGTAGTTGGACAGGGATAACCACATTGATTTTAAGAGAGAATCATTTTTCAGGGGGTATCCCGGACTTTTTGGCAAAATTTAACAACCTTCGTGAGTTACAACTTGGTGGAAATTTGTTTGGAGGCAAAATTCCTCAATCAATAGGAACATTGCAGAATCTGTTCTATGGATTGAATCTGAGTGCTAATGGATTGACAGGTGACATTCCTGCAGAAATTAGCAATCTAAAACTGCTGCAAAGTCTTGATATATCCTTGAACAATTTGACAGGAAAGCTAGATTTTCTTGGAAGTCTTATTTCATTAATTGAGGTCAATATTTCTTACAATTTCTTTGATGGTCCTGTACCTATGGGGCTAATGAAGTTATTGAATTCCTCACCATCATCATTCATGGGAAATCCTCTCCTATGTGTTAGTTGCTTGAGTTGCATCAGAACTATTTATGTGAAGCCATGTGTCTACAAATCAAGTGATCACAAAGGTATCAGTAAATTTCAAATTGTGATGATAGAACTTGGATCCTCAATATTTGTTTCTGCCATGCTTCTAATAACAATTCTAATGTATCTCCGTAGAAAGGAATTGAAAACAGACTACCCTCTTAAGCACCATAGAAAGGAATTGAAAACGAACCACCCTCTTAAGTTTCAGAGTTTTAGTTGGAGGAACACGCCTCTCATTTATGACCAAATAATGGAGGCTACAGAGAACCTAAATGACAGGTATATTATCGGCATAGGAGCCTATGGTGTTGTATACAAAGCCCAGTTGGTTACAGGACATGTTGTTGCTGTAAAGAAGGTTTCATTTGGAAGAAACAAGGAGAAGCGCGCAAGTTCCATGCAAAATGAAATTCAAACCATTGGGACTATTAGGCACCGAAATTTGGTCAAACTCTTTGGCTTCTTCTTTGGACCTAACTATGGTTTAATCATATATGATTACATAGAAAATGGAAGCCTTCATGATATTTTACATGAAATGGAACCCCCACCACCCTTAAAGTGGAATGTCCGGTTTAACATAGCTGTTGGAATTGCTCAAGGACTAGCATATCTGCATTATGATTGTATCCCACCCATAGTGCACCGAGACATCAAACCAAAGAATATACTTCTTGATGCTGATATGGAGCCTCTTATAGCTGACTTTGGCACTGCCCTGTACAGGAACCTGTCTGAGGATTCTAATACTTATTTTGGAACCAGGAGAAGGCTTTCATCCAACGTTGTTGGTACCCCTGGCTATATTGCACCGGGCAAAATTGAGAAGATTGCTGATCCATATCTAGCAAGTGCATTCCCCAATTCAGCAGCACTAGCCAAGCAGGTCACTGCATTGTTTTTGTTGGCATTACAATGCACAGAAAGGGAACCACATCAGAGACCGACCATGAAGGATGTTATTGGCTTTTATAACGTGTTCCAGTTGAGGTGTGATGATGTGGTTTATGGTGATGAAGTTGTTGTTGATGTAGCACCACAACCATGTGACTCTCTTAATCTCTTATCTGATGTTCCAGTTGTCAGTGCTGACCAGCATCTCCATGGTGAAACTGAAAGTAGTAGTGCTGCAACCCTGAGACAAAGAGAAGTTACATTTAATGTTGGAATCTTTCCTTGGGATGATTGGAAACTCATGTCTAGACCTGCAACCGGTATTGATGGACTTGTAATTAAACCAATGGGCAGCGGTAAGATTCAGGTTGAAAAAGTAGTGGTAGCTGCTCTAATTGTTCCAAAAATAACCTATGCATGGTCTTGGTGGTTCTACCTTCCCTCCATCACTGGTCCAGTAGTTACCACAGCCTTCAATTGGTTTTTCCTCTCACGTTGGGTTCAATATATGCACCAGCAGAAAGCATTGTATTCACAGCCCAAATCATACTTTATAAACACCAAATCAAGGCCACCCACCAACTCAGTGAGTAGCCATGGAAGAATTCCAAAGGAAAGGTTCTTTAAAGCCAATACTCTCCAATCTTTGGGTCATGGAGAAAGAGATGTCCATAATTCTAAATGTCTAAATTAA 3156 0.3992 MIRSTTTTLLLLAISFLYGASALLSDGVTLLSLLTSWTFVPSIISSSWNASDSIPCSWVGVQCDHAHNVISLNLTHQGIFGQLGPQVGNLYHLQTFVLLGNGFSGKVPSELSNCSLLQYLDLSGNNFSGQIPYSFKKLQNLQYLSLSSNLLTGEIPVSIWRITSLKHILVHNNSLFGELPLEMTKLKHLKNISLFDNQFSGVIPQSLGINSSLVKLDCMNNKFTGNIPPNLCFGKQLIELNMGINQLQGGIPSDVGRCATLRRLILKENNFTGSLPDFESNPNLIYMDISKNNISGLIPSSLGNCRNLTYINLSMNNFTGPTPSQFGKLVNLVILDLAHNNLEGTLPPQLSNCTKMDRFDVGFNFLNGSLPSSLSSWTGITTLILRENHFSGGIPDFLAKFNNLRELQLGGNLFGGKIPQSIGTLQNLFYGLNLSANGLTGDIPAEISNLKLLQSLDISLNNLTGKLDFLGSLISLIEVNISYNFFDGPVPMGLMKLLNSSPSSFMGNPLLCVSCLSCIRTIYVKPCVYKSSDHKGISKFQIVMIELGSSIFVSAMLLITILMYLRRKELKTDYPLKHHRKELKTNHPLKFQSFSWRNTPLIYDQIMEATENLNDRYIIGIGAYGVVYKAQLVTGHVVAVKKVSFGRNKEKRASSMQNEIQTIGTIRHRNLVKLFGFFFGPNYGLIIYDYIENGSLHDILHEMEPPPPLKWNVRFNIAVGIAQGLAYLHYDCIPPIVHRDIKPKNILLDADMEPLIADFGTALYRNLSEDSNTYFGTRRRLSSNVVGTPGYIAPGKIEKIADPYLASAFPNSAALAKQVTALFLLALQCTEREPHQRPTMKDVIGFYNVFQLRCDDVVYGDEVVVDVAPQPCDSLNLLSDVPVVSADQHLHGETESSSAATLRQREVTFNVGIFPWDDWKLMSRPATGIDGLVIKPMGSGKIQVEKVVVAALIVPKITYAWSWWFYLPSITGPVVTTAFNWFFLSRWVQYMHQQKALYSQPKSYFINTKSRPPTNSVSSHGRIPKERFFKANTLQSLGHGERDVHNSKCLN 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi45g00097 1051 ProSitePatterns Protein kinases ATP-binding region signature. 619 642 IPR017441 GO:0005524
Sebi45g00097 1051 SUPERFAMILY RNI-like 192 500 - -
Sebi45g00097 1051 Gene3D Transferase(Phosphotransferase) domain 1 691 795 - -
Sebi45g00097 1051 FunFam Leucine-rich repeat receptor-like protein kinase 25 181 - -
Sebi45g00097 1051 FunFam Os07g0541700 protein 691 782 - -
Sebi45g00097 1051 Gene3D Ribonuclease Inhibitor 176 279 IPR032675 -
Sebi45g00097 1051 SMART serkin_6 613 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00097 1051 ProSiteProfiles Protein kinase domain profile. 613 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00097 1051 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 194 520 - -
Sebi45g00097 1051 SUPERFAMILY L domain-like 26 278 - -
Sebi45g00097 1051 Pfam Leucine rich repeat 260 318 IPR001611 GO:0005515
Sebi45g00097 1051 Pfam Leucine rich repeat 133 175 IPR001611 GO:0005515
Sebi45g00097 1051 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 245 842 - -
Sebi45g00097 1051 Pfam Protein kinase domain 618 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00097 1051 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 576 690 - -
Sebi45g00097 1051 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Sebi45g00097 1051 Gene3D Ribonuclease Inhibitor 24 175 IPR032675 -
Sebi45g00097 1051 Gene3D Phosphorylase Kinase; domain 1 576 690 - -
Sebi45g00097 1051 SUPERFAMILY Protein kinase-like (PK-like) 591 845 IPR011009 -
Sebi45g00097 1051 Gene3D Ribonuclease Inhibitor 280 519 IPR032675 -
Sebi45g00097 1051 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Sebi45g00097 1051 SMART LRR_typ_2 329 353 IPR003591 -
Sebi45g00097 1051 SMART LRR_typ_2 138 162 IPR003591 -
Sebi45g00097 1051 SMART LRR_typ_2 401 425 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi45g00097 Sebi-Chr45 2162488 2165972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi45g00097 65 844 Receptor kinase-like Gene Family AT1G73080 42.561 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi45g00097 Pkinase 2.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi45g00097 - - adu:107496784 1091.26