Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi45g00083 ATGGCCTCCACTGAGCGGTGGAATTTTATTGGAAGAGGAGCAGGGAGAAGGATTGGATTCATGTATGAGCGTGAAGTCACCTTAGTTGAAAAGAAGCCCTCTGCCCTTCAAGACCTAGTGTTGCAGGCTACAGAGAACCTAGATGATCAGTATATTGTTGGCAAAGGAGCACACGGTACTGTGTATAAAGCCAAAACTAGGTGGACTGGTTTTCGCTGTAAAGAAGACTACTGGTTTGGAGAGGACTATGGTTTAATCTTGTATGAGTTTATGGAAAATGGAAGCCTTCATGATGTTTTGCATGAAATGGAACCCCCACCAGCCTTAACATGGGATTGCCGGTTTAAGATAGCTGTTGGAATTGCTGAAGGACTAGCATATCTGCATTATGATATTAGACCACCCATTGTGCACAGAGACATCAAACCAAAGAATATACTTCTTGATGCTTCTATGGAGCCTCTTATAGCTGATTTTGGCACTGCCCTGTACAGGAACCTGTCTGAGGATTCTAATACTAATTTTGGAACCAGGAGAAGGCTTTCATCCAACGTTGCTGGTACCCCTGGCTATATTGCACCAGAGAATGCTTATGCAATAGTTCAGAGCAGAAAGTCTGACGTATATAGCTATGGGGTTGTTTTGCTTGAGCTAATAACCAGAAAGAAAGTATTAATTCAATCTTTGAATAATGAGGCAGAGGTGACCACTTTAGTACGTTGGGCTAGATCTGTATGGCTGGAAACAGGCAAAATTGAGATGATTGTTGATCCATATCTAGCAAGTGAATTTCCCTATATACTATCACTAGTCAAGCAGGTCACTGAAGTGTTTTTGTTGGCATTACAATGCACAGAGAGGGATCCACGTCAGAGACCCACCATGAAAGATGTTATTGACTTTTATAAACGGAAAGTATTCCAGTTGAGTGGTGTGATCATTGTGACAAGCGTTGTCAAACAACATTGGAACGAACCAAATGCGGAGTGA 990 0.4212 MASTERWNFIGRGAGRRIGFMYEREVTLVEKKPSALQDLVLQATENLDDQYIVGKGAHGTVYKAKTRWTGFRCKEDYWFGEDYGLILYEFMENGSLHDVLHEMEPPPALTWDCRFKIAVGIAEGLAYLHYDIRPPIVHRDIKPKNILLDASMEPLIADFGTALYRNLSEDSNTNFGTRRRLSSNVAGTPGYIAPENAYAIVQSRKSDVYSYGVVLLELITRKKVLIQSLNNEAEVTTLVRWARSVWLETGKIEMIVDPYLASEFPYILSLVKQVTEVFLLALQCTERDPRQRPTMKDVIDFYKRKVFQLSGVIIVTSVVKQHWNEPNAE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi45g00083 329 ProSiteProfiles Protein kinase domain profile. 4 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00083 329 Pfam Protein kinase domain 81 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00083 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Sebi45g00083 329 SUPERFAMILY Protein kinase-like (PK-like) 41 304 IPR011009 -
Sebi45g00083 329 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 91 306 - -
Sebi45g00083 329 SMART serkin_6 47 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi45g00083 329 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 85 300 - -
Sebi45g00083 329 Gene3D Transferase(Phosphotransferase) domain 1 28 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi45g00083 Sebi-Chr45 2003345 2004678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi45g00083 30 303 Receptor kinase-like Gene Family AT1G73080 43.131 6.58e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi45g00083 Pkinase 5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi45g00083 - - tpra:123924637 402.134