Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi45g00054 ATGGATGGCATCTCGAAGGAGTCAAATGTGGGAGATGAGGAGAGTACTTACATGAAGGTTGGGACTTTTACTTCGCTGGGTTGTGGCAGAGACAATGAAGATGTGTTTTTGGGTTGGACAAAGGGGACAATGGTGGAGATAGGAAGAGAAAGTGTTTCTGGATGTGGACAGAATGATGAAGGAAATTCTAATGAGAAATCAAAAGATGATAGTGATGAAGGTGGCTACGATGAAGAATATGAAAGCACAGATGAAGAAGGAGGGCTTGCAGGAAATGGTGATGAGGGCATTGCCATTGATGGCATACATGACTTTGCCAATATTAATTGGAAAACACTTACCATGGAGGAGTTTATGAAATACCATTTTGCTGATCTTGAGGTTGCATTTAAGTGTTATAATTGGCATGCTAGACGAAAAGGATTTTATGCGCGTAAGGACAAGGTTGGTAAGAACAAAGCTAAAGTTGTTGTACGACAGATATTTGTGTGCTCTAGAGAAGGTTTTCCTAAAGTCAAGGAAGGGAGTTATAAAAGGGAACGAAGACGAATTATAAGATGTGGATGTAAAGCACATTGCAAGATGAGGTTGAACGCTGATAGTAATCGTTGGTATGTGACTTCATTTGTGGAAGACCACAATCATGCCATGTTGGAGGAGAGGTTCCGTGGCATGCTACCATCCCATAGGAGGATGGAGGAGCATGAAATAGAAGTCATGAACCAGATGAGAGCTGTTGGAATTAGCACGCCTAGCATATACCAAGCTTTTGCAAGTCAGATAGGTGGACGTGAGAATGTTGGGTTTAAGACGAGTGATATGTACAATGAGTTAGGAAAGCAAAAGAGGCTAAAAAAAAATGATGCGAATGAAGCTATGTCGTTCTTAGAAGGGATTAGGAAAAAAGATCCTGCCATGTTTGTGAGACACAAGACAGATGATGATGGCAGACTACAACACCTGTTCTGGTGTGATGGTATGTGCCAGGTGGATTATGAATTATTTGGCGATGTTCTTGCATTTGATGCAACCTATGGCAAGAACAAATATTATTGGCCTCTCATTGTCTTTTCAGGTGTTAATCACCATAATCCGACAACTATATTTGCATTTGCAGTTGTTTCAAATGAAACTGAGGACACGTATGTGTGGGTACTAGAACAGTTTTTCAATGCCATGAAGGGCAAGGCTCCAAAATCTGTTATCACAGATGGTGATAGGGCCATGAGGAATGCTATCAGAATTGTTTTCCCTAATGCTACTCACAGGCTTTGTACATGGCATTTGATTCGTAATGCAACAAGCAAGGTTGGTAAACACGGGTTTAGTGCACAGTTCACTAAATGTATGTTAGGTGATTATGAGATTGTTGAATTCAAGCGTAAGTGGGAGAATATGATATATCAATTTGACATACAAGAGCATAGGGAAATTGAGGCTGATTTTGCTTGTGTTAATGGTGATCAACCTTTGGAGACTTCTTATCGTGAGCTTGAGAATTCTGCTTCTGCAATATTCACTCGTGACGTGTTCTTCATATTTAGACGCATTTTAACAAAGGCTGCTAAGTTAAAGGTTGTTGGTTCGAAAACTTCGTTTTCATGTACAATATATTCAGTGCGTAAGAATGTTTTTAGTGAACAAGAATGGTTTGTGAGTTTTGAGCCTAGAAGTAGTCACTTCAAGTGTTGTTGCAGGAGGATGGAATCTTATGGAATTCCATGTGATCACATAGTGGCTGTTATGGTATTCCATGTGACCACTACTTGGGGAATGCTATGGAGAATTTTCCAGTGA 1797 0.4018 MDGISKESNVGDEESTYMKVGTFTSLGCGRDNEDVFLGWTKGTMVEIGRESVSGCGQNDEGNSNEKSKDDSDEGGYDEEYESTDEEGGLAGNGDEGIAIDGIHDFANINWKTLTMEEFMKYHFADLEVAFKCYNWHARRKGFYARKDKVGKNKAKVVVRQIFVCSREGFPKVKEGSYKRERRRIIRCGCKAHCKMRLNADSNRWYVTSFVEDHNHAMLEERFRGMLPSHRRMEEHEIEVMNQMRAVGISTPSIYQAFASQIGGRENVGFKTSDMYNELGKQKRLKKNDANEAMSFLEGIRKKDPAMFVRHKTDDDGRLQHLFWCDGMCQVDYELFGDVLAFDATYGKNKYYWPLIVFSGVNHHNPTTIFAFAVVSNETEDTYVWVLEQFFNAMKGKAPKSVITDGDRAMRNAIRIVFPNATHRLCTWHLIRNATSKVGKHGFSAQFTKCMLGDYEIVEFKRKWENMIYQFDIQEHREIEADFACVNGDQPLETSYRELENSASAIFTRDVFFIFRRILTKAAKLKVVGSKTSFSCTIYSVRKNVFSEQEWFVSFEPRSSHFKCCCRRMESYGIPCDHIVAVMVFHVTTTWGMLWRIFQ 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi45g00054 598 PANTHER OS01G0519700 PROTEIN 478 583 - -
Sebi45g00054 598 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Sebi45g00054 598 MobiDBLite consensus disorder prediction 50 93 - -
Sebi45g00054 598 Pfam MULE transposase domain 338 432 IPR018289 -
Sebi45g00054 598 Pfam FAR1 DNA-binding domain 133 218 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi45g00054 Sebi-Chr45 1517054 1519432 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi45g00054 MULE 5.1e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi45g00054 - - ahf:112770447 431.409