Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi45g00051 ATGCAAGATTTTGGATATGATAGGCACATATACAGTGTGTTGGAGGTGAACAAGACTAGCTATGAAAATTGCATAGACACAGGATTTATTAAGAACATAACAAGGGGTGGAGGAAGAGACGTGTTTCAGTTGACAAAGGCTAAGACCTATTACTTCCTAAGTGGAGGAGGTTTCTGTTGGCAAGGGATGAAGGTTGCTATACATGTTACTGATGCTGAAGTTGCTGATGTACCTGTTCCAGCTCCACTAATAAAAAGTGGTTCTTCTGCTTCAGATTCTTGTGGCATTAAGGTCAACCACACACTTGTGGTGCTCATCTTAGTCTTGATGTGGACCATACTCTTCAAATAA 351 0.4074 MQDFGYDRHIYSVLEVNKTSYENCIDTGFIKNITRGGGRDVFQLTKAKTYYFLSGGGFCWQGMKVAIHVTDAEVADVPVPAPLIKSGSSASDSCGIKVNHTLVVLILVLMWTILFK 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi45g00051 116 ProSiteProfiles Phytocyanin domain profile. 1 71 IPR003245 GO:0009055
Sebi45g00051 116 PANTHER BLUE COPPER PROTEIN 4 78 IPR039391 GO:0009055
Sebi45g00051 116 SUPERFAMILY Cupredoxins 4 70 IPR008972 -
Sebi45g00051 116 Gene3D - 2 70 IPR008972 -
Sebi45g00051 116 Pfam Plastocyanin-like domain 4 63 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi45g00051 Sebi-Chr45 1483752 1484102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi45g00051 4 109 Phytocyanin Superfamily AT2G27035 42.991 1.31e-23 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi45g00051 - - gmx:100812113 142.124