Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi458g00034 ATGAAGGAACTTAGAGCCAGGATGGACAAAGATGTAGAGCAAGTCCTTAAACGTGTCAAGATCATTAAAGGCAAGCTTGAAGCCTTAGAGCGTTCCAATGCAGCTAACAGAAGCCTTCCAGGTTGTGGTCCTGGTTCTTCAGCTGATAGAACCAGGACTTCAGTGGTTAGTGGCTTGGGGGAGAAACTCAAGGACATGATGGATGATTTTCAAGGGTTGAGAGCAAGAATGCAACAAGAGTATAAGGAAACAGTTGAAAGAAGGTATTTCACAATCACAGGAGAGAAAGCAAATGAAGAAACTATAGAGAATTTGATAGCAAGTGGAGAAAGTGAGAGTTTTCTCCAAAGGGCAATTCAAGAACAAGGCAGGGGTCAGATTATGGACACCATATCAGAGATTCAAGAAAGGCATGATGCTGTTAAGGAAATAGAGAAAAACTTGATTGAGCTTCATCAGGAAGAGGCACAGATCAACTTCAGGAAGCTAGAGAGTATCCAAAAGAGCTCCAGGAAGTGGACTTGTTATGCCATACTTCTTGGTATTGTCCTCATTGTTGTGCTCCTATTCCTCTCTTGA 579 0.4231 MKELRARMDKDVEQVLKRVKIIKGKLEALERSNAANRSLPGCGPGSSADRTRTSVVSGLGEKLKDMMDDFQGLRARMQQEYKETVERRYFTITGEKANEETIENLIASGESESFLQRAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQEEAQINFRKLESIQKSSRKWTCYAILLGIVLIVVLLFLS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi458g00034 192 CDD SynN 1 118 IPR006011 GO:0016020
Sebi458g00034 192 PANTHER SYNTAXIN 3 153 IPR045242 -
Sebi458g00034 192 Gene3D - 1 158 - -
Sebi458g00034 192 SUPERFAMILY t-snare proteins 2 153 IPR010989 GO:0016020|GO:0016192
Sebi458g00034 192 Pfam Syntaxin 1 153 IPR006011 GO:0016020
Sebi458g00034 192 Coils Coil 134 154 - -
Sebi458g00034 192 SMART SynN_4 1 82 IPR006011 GO:0016020
Sebi458g00034 192 Coils Coil 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi458g00034 Sebi-Chr458 541043 541713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi458g00034 1 189 SNARE and Associated Proteins AT1G61290 67.123 1.03e-98 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi458g00034 K08486 - gmx:100818999 289.271