Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi457g00033 ATGAAGTTCAATCCAAGGGTTTCAAGCAGCCGGCGCAAGAGCCGCAAGGCGCATTTCACGGCGCCGTCGAGCGTGCGTCGCGTAGTGAGGGGAACCTACAAGGGCCGCGAAGGAAAGGTGGTGCAGGTGTACCGCCGCAAGTGGGTTATCCACATCGAGCGCATCACTCGTGAGAAGGTGAACGGTTCAACCGTCAACGTTGGCATTCACCCTTCCAAAGTCGTCGTCACCAAGCTCCGTTTGGATAAGGATCGCAAGTCCTTGCTCGATCGCAAGGCCAAGGGTCGTGCCGCCGCCGATAAGGAAAAAGGCCACCAAATTCGCTCCTGA 330 0.5758 MKFNPRVSSSRRKSRKAHFTAPSSVRRVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIHPSKVVVTKLRLDKDRKSLLDRKAKGRAAADKEKGHQIRS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi457g00033 109 Gene3D - 1 27 IPR014722 -
Sebi457g00033 109 NCBIfam 50S ribosomal protein L24 27 93 IPR005756 GO:0003735|GO:0006412|GO:0015934
Sebi457g00033 109 MobiDBLite consensus disorder prediction 1 20 - -
Sebi457g00033 109 Pfam KOW motif 27 53 IPR005824 -
Sebi457g00033 109 Gene3D - 28 96 IPR014722 -
Sebi457g00033 109 MobiDBLite consensus disorder prediction 1 22 - -
Sebi457g00033 109 SUPERFAMILY Translation proteins SH3-like domain 8 96 IPR008991 -
Sebi457g00033 109 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 28 IPR005756 GO:0003735|GO:0006412|GO:0015934
Sebi457g00033 109 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 92 IPR005756 GO:0003735|GO:0006412|GO:0015934
Sebi457g00033 109 CDD KOW_RPL26 28 76 IPR041988 GO:0003723
Sebi457g00033 109 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi457g00033 Sebi-Chr457 402009 402425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi457g00033 1 109 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 69.565 1.91e-59 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi457g00033 K02898 - gmx:100788996 152.91