Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi457g00029 ATGAAAAAGGAAAAGGAGAAAGAGGAAGTGAGTGATGCAATGAGTGAAGCCATAGAACCTTGGGATATGGAGGAACGGTATGAGCCATTGAAGGATCTTGGTTCGGGGAACTTTGGAGTGGCCAAGCTAGCCAAAGACAAGAACACAGGGGACCTTGTTGCTGTCAAATACATTGAAAGGGGAAAAAAGATTGATGAGAATGTTCAAAGGGAGATAGTTAACCACCGATCTCTAAGGCATCCAAATATTGTCAGGTTCAAAGAGGTATTTCTGACCCCTACTCATTTAGCTATTGTCCTGGAGTATGCTGCTGGTGGTGAACTCTTTGAGAGGATATGCGCCGCTGGTCGATTGAGTGAAGATGAGGCAAGATATTTCTTCCAGCAACTATTATCTGGAGTTAGCTACTGTCATTCCATGCAAATTTGTCATAGAGATCTGAAATTGGAAAACACTCTGTTGGACGGAAATCCAGCTCCAAGACTTAAAATTTGTGACTTTGGTTTCTCCAAGTCCGCTTTGCTGCACTCTCAACCTAAATCCACAGTTGGAACTCCTGCATACATTGCTCCAGAGGTTTTGTCACGAAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCGTGTGGTGTGACTCTTTATGTCATGTTAGTTGGATCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGAATGTTGGGAGAATAATGAGTGCTCAATACGCCATACCTGACTATAGGATCACCATCTCTGAGATAAAACAACACCCTTGGTTTCGGAAGAACTTGCCTAGAGAGATAATTGAGGCTGATAAAAAAGGTTACGAGGGAACAGAGAAAGACCAACCAAGCCAAAGTGTAGAAGAAATCATGCGAATCGTACAAGAGGCAAGGACACCAGGGCTAAAAACCACAGGCTCATCGGATGCTGTGGATGTTGATGAGACTGTTGAGGAAGTTGATGTCAGTGGCGACTATGCAAAACTCGTGTAG 1002 0.4311 MKKEKEKEEVSDAMSEAIEPWDMEERYEPLKDLGSGNFGVAKLAKDKNTGDLVAVKYIERGKKIDENVQREIVNHRSLRHPNIVRFKEVFLTPTHLAIVLEYAAGGELFERICAAGRLSEDEARYFFQQLLSGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGSYPFEDPEDPRNFRKNVGRIMSAQYAIPDYRITISEIKQHPWFRKNLPREIIEADKKGYEGTEKDQPSQSVEEIMRIVQEARTPGLKTTGSSDAVDVDETVEEVDVSGDYAKLV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi457g00029 333 Gene3D Transferase(Phosphotransferase) domain 1 103 269 - -
Sebi457g00029 333 Pfam Protein kinase domain 27 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi457g00029 333 SMART serkin_6 27 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi457g00029 333 PANTHER SERINE/THREONINE KINASE 25 288 - -
Sebi457g00029 333 SUPERFAMILY Protein kinase-like (PK-like) 18 270 IPR011009 -
Sebi457g00029 333 FunFam Serine/threonine-protein kinase SRK2E 22 102 - -
Sebi457g00029 333 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Sebi457g00029 333 Gene3D Phosphorylase Kinase; domain 1 6 102 - -
Sebi457g00029 333 ProSiteProfiles Protein kinase domain profile. 27 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi457g00029 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Sebi457g00029 333 FunFam Serine/threonine-protein kinase SRK2A 103 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi457g00029 Sebi-Chr457 333937 337866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi457g00029 26 272 CBL-interacting serine-threonine protein kinases AT4G24400 42.182 8.52e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sebi457g00029 Pkinase 1.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi457g00029 K14498 - gmx:547790 528.094