Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi457g00022 ATGTCTGAACTGAACCTCCTCCAAGCTTCTCAGTCTCACCGCAAGGGCAAGGCCTTATTCCTTATTCAAGGATGTCATTGGAGTTGGGAAGCGACGCTTTGTGATTTCCGTTTCTCATCGAAACCGGAACTCTCTCTTGGTAGTAACCACTGCAGGCCTCATCCTCCGTCGCACCCAAGGAATGGGGGTTTGGAGGAGGAGATGAATTTGGAGTCATCAAGAGCAATGACAACATCAGTCAATAAAAGTCATTCTGAAGAAAGATTTGGGAAGCCATTGATGGAAAATGGGAACTGCACTCCGCTTGTTCGGCCCATGTATAAGCGGCGTAAAGTTTCCGCCATTCGTGATTTCCCAAAAGATTGTGGACCGTGTGCTTCAAAAATTGATCCAGTGTTAAAGGTAGATAATGCTGATTTTGGTTCTGCTAATGGTACAATTGTTGAGGATAAAAATGGTGAATGTTTAGGGGGTGACACTGTTAGAATTTCCAAGTGTGGAGATGATCCTCAACATTCTGAGTTAAGAAAAGATTCGATTCATTTTGAGACTCTTGGCCAAACATTTGACTGTAGTATGAAGAAAGAAAATCCTGTAGTCTCAACTCATCAAGTGGATGGGCCTACTTCAGCAAATGATGATCCTGGAAAAGTGGCACCGGTAGGCATGGAGGTGTTGGATACAGAATTTGCAACAGAAAACTCTGTAGAACATGACTCTTATATATCAAAGCCATCTTCTACAGTGGGTGAGGTGGCTATGTCTGATGGTGAAAAATCATTATTATTGAATGTCTATTTAGCTGGTTCTAGTGCTTGTTTGGAGGAGAGTGTAACTAGAAGGTATCTTCCTCGAAGAAAAGTTTCAGCTGTCAGAAACTTTCCTCTTTTTTGTGGACGCAATGCTCCACGTCTCAGTAAAGATGAGTGTCAAATGAAGATCTCTTCTTTGAATAATAAGAGAGTGGGTCAACAGAACTTGGCTGTAGATGGCAATCCATTGAAAAGAGTAGCAGGCACTGATGTAAAAGAAGTGGAAAATAACATTCAAGCTGAACATGGTTGCAAGAGAAAGCTTGCGGACATTGTTCAAGCTGATTCTGGAGGGAATCCTACAGAGAAAGTTAAGATGTCGGGTGTATTTGAACCATGTTCTGCGTCGAAATTGCCACTGGAAAACACAAGAGAAAAGTACAATACCCTTCCTGAAAAAAGTAATCATCATCAGGTTGAAATTAATTCCAAGGCAGTTGTTAAAGAGGAAACTAGAGATACTGTACAGGTTGAGGGAACATCAGGGCTAGAGTTGATAGTTTACCCAGAAGTCCAGGGTCGTGAGACAAAGCCTTTGGATATGTCTAGTTATCAGCGTGAGTCAAAAGGAAATTTGAATAGATTGGTGGTCTCATCAGACAGGAAAGTAGTGTTAGGTCTGATGTCTGAATCAGAGTGTCCTTCAAGGTCTGCTGATAAAGGTTCTTCCAAATTTAAGTTGATTGGTGGTACAAATGAAAGCAAGGGAAAGAAAGTTGATTTTGCTGCACGGCTAGGCAGGTCTAAAACTGCTATCAAGACTAAAGATGCACGGAATCATTCTGGGCAGAAGCTGTTGAAAAAGAAAAAAGAAAACACTGCTTCTGATGATATGGGTCAATTAGTGATTTGGGAAAAAGATTCTCCTGACCCTAATGAAAACAACAAAGACTTTCAAATTGTCCCAAAATCACATGGTTTGGATGTATATGTTCCTCCTTTGGATTATCGTAATTCCAGTGGTCATGAGAATGACTCAAATGTGACCCGAAATAAAGTGAGGGAAACATTACGCCTTTTTCAAGCTGTTTCTAGAAGGCTTTTGCATGAAGTTGAAGCTAAGTCAGATGAGAAATCAAATAATAAAAAGAGGATTGATTTACATGCTGCGAAGATCCTTAAGGAGAAAGGGAAATATGTTAACATAGGCAAGCAGATCTTGGGATCTGTTCCTGGGGTTGAGGTTGGTGATGAATTTCAGTACAGGGTGGAGCTTACTGTAATTGGCCTTCATCGCCAGATTCAGGGAGGGCAGGGTGGGAATGTGATGAGCACTGATAAAGATAAAGAACCTGAAGATCAAAAGCTTGAACGGGGCAATCTTGCTTTGAAGAACAGTAGTGAGGAAAAGAATCCTGTTAGGGTGATACGTGGCTCCGAATCAATGGATGGAAAATGTAAGACTTATGTTTATGATGGACTGTATCTTGTTGAGTCATGTTGGCAGGATATGGGGCCACATGGGAAACTGGTTTATAGGTTTCGCCTGCGAAGAATCCCAGGTCAACCAGAGCTTGCTTTAAAGGAAGTGAAGAAATCTAAAAAGTTCAAAACAAGAGAAGGTCTATGTGTTGATGATATTTCTTATGGTAAAGAGCGAATTCCCATATGTGCTGTGAACACCGTAGATGATGAAAAACCCCCACCCTTTACATACATAACTGACATGATTTATCCTGATTGTTGCAATCTTGTTCCTCCAGAAGGATGTAATTGTACTAATGGATGCTCTGACTTGAAGACATGTTCTTGTGTAGTAAAAAATGGGGGAGAGATCCCATTCAACCATAATGGGGCTATTGTAGAAGCAAAGCCTTTAGTCTACGAGTGTGGACCTTATTGTAAGTGCCCTTCAACCTGCCATAACAGAGTCAGCCAGCTTGGAATAAAGTTTCAACTTGAAATTTTTAAAACCGATACAAGGGGATGGGGTGTAAGATCCCTAAATTCCATCCCTTCAGGAAGTTTTATCTGTGAATATATAGGAGAGGTTCTTGAAGAAAAGGAAGCTGAAGAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACTACAGCAACAGTAATCTTTGGGATGGACTTTCGACCCTCATGCCAGATGCACAATCAAGTTCTTCTGAAGTTGTGAAGGATGGTGGCTTCACCATTGATGCAGCCCAGTTTGCTAATGTGGGGAGATTCATCAACCATAGTTGCTCCCCTAATCTTTATGCTCAGAATGTCCTTTATGATCATCATGACAAAAGGATCCCTCACATAATGTTCTTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGGCTTATGATTACAATTATATGATGGATCAAGTCCGTGATTCTGATGGCAATATAAAAAAGAAAGAATGCTTTTGTGGTTCTGTGGAATGTACTGGTAGGATGTATTGA 3228 0.4089 MSELNLLQASQSHRKGKALFLIQGCHWSWEATLCDFRFSSKPELSLGSNHCRPHPPSHPRNGGLEEEMNLESSRAMTTSVNKSHSEERFGKPLMENGNCTPLVRPMYKRRKVSAIRDFPKDCGPCASKIDPVLKVDNADFGSANGTIVEDKNGECLGGDTVRISKCGDDPQHSELRKDSIHFETLGQTFDCSMKKENPVVSTHQVDGPTSANDDPGKVAPVGMEVLDTEFATENSVEHDSYISKPSSTVGEVAMSDGEKSLLLNVYLAGSSACLEESVTRRYLPRRKVSAVRNFPLFCGRNAPRLSKDECQMKISSLNNKRVGQQNLAVDGNPLKRVAGTDVKEVENNIQAEHGCKRKLADIVQADSGGNPTEKVKMSGVFEPCSASKLPLENTREKYNTLPEKSNHHQVEINSKAVVKEETRDTVQVEGTSGLELIVYPEVQGRETKPLDMSSYQRESKGNLNRLVVSSDRKVVLGLMSESECPSRSADKGSSKFKLIGGTNESKGKKVDFAARLGRSKTAIKTKDARNHSGQKLLKKKKENTASDDMGQLVIWEKDSPDPNENNKDFQIVPKSHGLDVYVPPLDYRNSSGHENDSNVTRNKVRETLRLFQAVSRRLLHEVEAKSDEKSNNKKRIDLHAAKILKEKGKYVNIGKQILGSVPGVEVGDEFQYRVELTVIGLHRQIQGGQGGNVMSTDKDKEPEDQKLERGNLALKNSSEEKNPVRVIRGSESMDGKCKTYVYDGLYLVESCWQDMGPHGKLVYRFRLRRIPGQPELALKEVKKSKKFKTREGLCVDDISYGKERIPICAVNTVDDEKPPPFTYITDMIYPDCCNLVPPEGCNCTNGCSDLKTCSCVVKNGGEIPFNHNGAIVEAKPLVYECGPYCKCPSTCHNRVSQLGIKFQLEIFKTDTRGWGVRSLNSIPSGSFICEYIGEVLEEKEAEERTGNDEYLFDIGNNYSNSNLWDGLSTLMPDAQSSSSEVVKDGGFTIDAAQFANVGRFINHSCSPNLYAQNVLYDHHDKRIPHIMFFAAENIPPLQELAYDYNYMMDQVRDSDGNIKKKECFCGSVECTGRMY 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi457g00022 1075 Gene3D - 641 689 IPR036987 -
Sebi457g00022 1075 Gene3D - 690 789 IPR036987 -
Sebi457g00022 1075 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 514 1075 IPR025794 GO:0016571
Sebi457g00022 1075 Pfam SAD/SRA domain 688 773 IPR003105 -
Sebi457g00022 1075 ProSiteProfiles SET domain profile. 902 1045 IPR001214 GO:0005515
Sebi457g00022 1075 ProSiteProfiles Post-SET domain profile. 1059 1075 IPR003616 -
Sebi457g00022 1075 Gene3D SET domain 790 1075 IPR046341 -
Sebi457g00022 1075 SUPERFAMILY SET domain 785 1046 IPR046341 -
Sebi457g00022 1075 ProSiteProfiles Pre-SET domain profile. 839 899 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi457g00022 1075 SUPERFAMILY PUA domain-like 640 782 IPR015947 -
Sebi457g00022 1075 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 460 1068 - -
Sebi457g00022 1075 SMART G9a_1 654 773 IPR003105 -
Sebi457g00022 1075 ProSiteProfiles YDG domain profile. 621 769 IPR003105 -
Sebi457g00022 1075 SMART PostSET_3 1059 1075 IPR003616 -
Sebi457g00022 1075 Pfam Pre-SET motif 798 894 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi457g00022 1075 SMART set_7 902 1051 IPR001214 GO:0005515
Sebi457g00022 1075 SMART preset_2 795 886 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi457g00022 1075 Pfam SET domain 913 1045 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi457g00022 Sebi-Chr457 276600 281471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi457g00022 598 1072 Su(var)3-9 homologs AT5G04940 38.168 4.42e-102 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi457g00022 SET 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi457g00022 K11420 - gmx:100803378 1199.5