Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi457g00001 ATGGGTACACCCATCTTCCTCATTCTCTTCTGGGTTTTCAGCTTCCAAAGCTCTGTCATTGAGGTGCATTCCCAAGATGCTGGTCCTGACATCCGCTATCCATTTCACATAAAAGGTGAGCAGCCCCTCTATGAAGCCCTTCCTGGCTTTGAGCTGCTTCGCAAAAACAACTTCACCACTATCCACTTTCCATCTTATGGGGATTTGGTTGTCAAGTCCATTTCTTATGACACCAAAAAGATTGATCTTCTTGACCCAAAAAATTGTACCCACCAAGTCTTTCTTAACCTCAATCTCACACTCACACCGTTCCACCACTACAATGTTCTGAAAAACTACACATACCTCAATTGCTCCACTAGCCTTCCACCTCCTTTGATGGAGGTTCCATGTTTAAGTGCTTCAATTTATCATGTTTACACAGTTGACCCTGCACTGCCTGTGCCGGGTTCTTGTAAGGGAATCAAGACCGTTGCTATTCCTTTCAAATATAGCCCTTATCTCTCAGATAACAGTCTTGGTCTTAGATTAACATGGGACTTGCGTGAATCTGAATACAGCAAAGCAGGGAACCATACAAGATATTCCCACACAGCACGCAATACTGGTAAATTGAACTCAATTCCTTTTCTCTTGATCTCCTCTTGTTAG 651 0.4316 MGTPIFLILFWVFSFQSSVIEVHSQDAGPDIRYPFHIKGEQPLYEALPGFELLRKNNFTTIHFPSYGDLVVKSISYDTKKIDLLDPKNCTHQVFLNLNLTLTPFHHYNVLKNYTYLNCSTSLPPPLMEVPCLSASIYHVYTVDPALPVPGSCKGIKTVAIPFKYSPYLSDNSLGLRLTWDLRESEYSKAGNHTRYSHTARNTGKLNSIPFLLISSC 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi457g00001 216 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 198 IPR046948 -
Sebi457g00001 216 Pfam Wall-associated receptor kinase galacturonan-binding 29 84 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi457g00001 Sebi-Chr457 7645 8295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi457g00001 32 206 C3H Transcription Factor Family AT2G25410 29.319 4.51e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi457g00001 - - lja:Lj2g3v1989230.1 293.893