Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi455g00028 ATGGTAAGATCAGAGACTACTAATTCTAGTACTGAAGAAAGTGATCATCATGATCAACAAGAAGTTCAAGATGACTCTGCAGGAACAAAAAGATCTTATGATTGCACATTCTGCAAAAGGGGTTTCACAAATGCACAGGCTTTAGGAGGCCATATGAATATTCACAGGAAAGAGAGAACCAACAAGGCCAAGCAAAACACACCCAACAATAATATTATTGATCAGGAATTCAAAGCTGCCTCTCCTTTTGTTCCACAAGTTTCATCAAACCAACCCTCAAGGTATTACTGCATTTTGGAGACTACTCCAAGGAACCATGACATGTATTTTCAACCATCATCAGTAACTAATAATAGCACTAGAAACTACCCACCTGCTGCATGTACCTTTCAATATGATTTTCTTAACACAAGGAACCAAGAGGTGTTAGGTACCAATTTAAGTCTCCAAATTGGTTCAACTCATGTGGATACTACTGATCAATTTATTGACAAAGATTGTGAAGGGGTGGACTTAGAGCTCAGGCTTGGTCATGATTCATATTCAGACTACTAA 555 0.382 MVRSETTNSSTEESDHHDQQEVQDDSAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKERTNKAKQNTPNNNIIDQEFKAASPFVPQVSSNQPSRYYCILETTPRNHDMYFQPSSVTNNSTRNYPPAACTFQYDFLNTRNQEVLGTNLSLQIGSTHVDTTDQFIDKDCEGVDLELRLGHDSYSDY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi455g00028 184 Gene3D Classic Zinc Finger 7 93 - -
Sebi455g00028 184 MobiDBLite consensus disorder prediction 1 27 - -
Sebi455g00028 184 PANTHER OS07G0101800 PROTEIN 13 179 - -
Sebi455g00028 184 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Sebi455g00028 184 SUPERFAMILY beta-beta-alpha zinc fingers 30 60 IPR036236 -
Sebi455g00028 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Sebi455g00028 184 MobiDBLite consensus disorder prediction 9 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi455g00028 Sebi-Chr455 712222 712776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi455g00028 33 121 C2H2 Transcription Factor Family AT5G43540 45.745 1.29e-16 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi455g00028 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi455g00028 - - mtr:25483021 207.608