Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi455g00021 ATGGCAACACAACCTGAAGTTGAACATCCTAAGAAGGCCTTTGGTTGGGCAGCTAGAGATTCTTCTGGTTTTCTCTCCCCTTTCAATTCTCCAGAAGATGTGGCATTCAAAGTGTTGTACTGTGGGATGTGTCACTCTGACCTCCACAGGGTGAAGAACGATTGGGGCACTTCTACCTATCCATTAGTACCTGGGTATGAGATTATTGGTGTAGTGACAGAGGTGGGAAGCAAAGTGCAAAAATTCAAAATTGGGGATAAAGTAGGTGTGGGATGCATGGTTAATTCCTGCAGGAAATGTGAAAACTGTGTTAACAATTTTGAAAATTACTGCCCACAATTTACACTCACATATGGTGCCAAATATATTGATGGCACCACCACATATGGAGGCTACTCTGACTCTATGGTTGTAGATGAGCACTTTGTGCTTAGAATTCCTGATGGCTTCCCTCTTGATGCTGCTGCACCTCTCCTCTGTGGTGGAATTACAGTGTATAGCCCTCTTAGATATTATGGATTTGACAAGCCTGGTTTGCATGTGGGTGTGGTTGGTCTTGGTGGGTTAGGCCATATAGCTGTCAAATTTGCTAAAGCTTTTGGGGCTAAGGTGACAGTAATAAGTACCTCACCCAACAAAAAGGAAGAAGCAATACAACACTTGGGAGCTGACAGCTTTCTAGTAAGCACTGACCAAGATCAGATGCAGGCTGCAATGGGCACCTTGGATGGTATTATAGACACAGTTTTTGCCACTCATCCCCTCTTACCTTTGATTAATTTACTCAAGCCTCATGGAAAGCTTGTAATAGTGGCTGGAGCAGAGAAGCCTTTGGAGATGCCAGTCGCTCCTTTACTTACAGGGAGAAAGATGATAGGTGGTAGCCTTATTGGAGGGATAAAAGAGACCCAAGAAATGATTGATTTTGCAGCACAACACAATGTAAAACCTGACATAGAGGTTATTCCTATTGATTATGTCAACACAGCAATGGAGCGCCTCCTCAAAGGAGATGTCAAATATCGATTTGTGATTGACATTGGAAACACATTGAAACCAAGTTCTTAA 1068 0.4298 MATQPEVEHPKKAFGWAARDSSGFLSPFNSPEDVAFKVLYCGMCHSDLHRVKNDWGTSTYPLVPGYEIIGVVTEVGSKVQKFKIGDKVGVGCMVNSCRKCENCVNNFENYCPQFTLTYGAKYIDGTTTYGGYSDSMVVDEHFVLRIPDGFPLDAAAPLLCGGITVYSPLRYYGFDKPGLHVGVVGLGGLGHIAVKFAKAFGAKVTVISTSPNKKEEAIQHLGADSFLVSTDQDQMQAAMGTLDGIIDTVFATHPLLPLINLLKPHGKLVIVAGAEKPLEMPVAPLLTGRKMIGGSLIGGIKETQEMIDFAAQHNVKPDIEVIPIDYVNTAMERLLKGDVKYRFVIDIGNTLKPSS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi455g00021 355 Pfam Alcohol dehydrogenase GroES-like domain 32 145 IPR013154 -
Sebi455g00021 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 318 347 - -
Sebi455g00021 355 Gene3D - 161 317 - -
Sebi455g00021 355 SMART PKS_ER_names_mod 17 345 IPR020843 GO:0016491
Sebi455g00021 355 Gene3D - 16 347 - -
Sebi455g00021 355 Pfam Zinc-binding dehydrogenase 188 311 IPR013149 -
Sebi455g00021 355 FunFam Uncharacterized protein 16 160 - -
Sebi455g00021 355 CDD CAD1 14 346 IPR047109 GO:0016616
Sebi455g00021 355 FunFam Cinnamyl alcohol dehydrogenase 161 317 - -
Sebi455g00021 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 151 316 IPR036291 -
Sebi455g00021 355 PANTHER ALDEHYDE REDUCTASE 5 350 IPR047109 GO:0016616
Sebi455g00021 355 SUPERFAMILY GroES-like 29 178 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi455g00021 Sebi-Chr455 462400 464393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi455g00021 11 354 Monolignol Biosynthesis Gene Families AT4G37990 68.286 1.70e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi455g00021 K23232 - gmx:100816901 586.26