Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi455g00019 ATGACTAATGGATTTTGTAACTGGAGGCATGATATGTTTAACTATGCACAAAACAACACAAGCAACCAAAGTGCATGTAGATTATGCAACCAAGCTTTCATAAACACTCAAGCCCTCATAACCCATATTGAGTCTCACATGGAACATGAAAAGGCTGCCATAAGAAGGCTCTACAATTCACCACAAGATATCAACTCTCATAAACAAGTGGTTTTCGATCACTTTCCATCTAGTTTCCAATTTCCAAAAGAAACCCAAAACATCACTGAGGGAAGATTTTTCCAATCATCACCACAACCTTTGACCATGCCTCAGCCAGGAATAAACCCATTTTTCAGGAATGAAGTAGCTGGAATAACAGAGTTGTCAACTCCACAATTCTATCAAAGGAAGCTAGCAGAAGAATCTCCAAAACATGCTACTAAGGCATATATCATGCAGCTGGAGAAACCCATCAAGAAGATTGATTCCATTGATTTGGTTAACATTGATGATGACAACTCAAAGGTGCAAACATTGGACTTCGCACTTAATCTCTGGAGAATTAAATTATGGTATAGCCTTTACATAATTAGGTTGTTATGCTATCAGCTTGATTGA 600 0.3783 MTNGFCNWRHDMFNYAQNNTSNQSACRLCNQAFINTQALITHIESHMEHEKAAIRRLYNSPQDINSHKQVVFDHFPSSFQFPKETQNITEGRFFQSSPQPLTMPQPGINPFFRNEVAGITELSTPQFYQRKLAEESPKHATKAYIMQLEKPIKKIDSIDLVNIDDDNSKVQTLDFALNLWRIKLWYSLYIIRLLCYQLD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi455g00019 199 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Sebi455g00019 199 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi455g00019 Sebi-Chr455 396845 397516 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi455g00019 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi455g00019 - K09228 lja:Lj2g3v1643270.1 149.828