Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi453g00046 ATGGGTGCCCAAACTATACCCATCGACTTCCACAACACCCGGGTCTTACCCGATTACGATGTATTCATACACACTTCCGATGGAACACGCATTCCCGCACACGCTGCCATTCTGGCTTCGGTGTCGCCGGTTTTGGAAAACTTGATAGATCGACCGCGGAAGCATCGGAGCTCCGAAAGAATAATCCAAATCCACGGCGTTCCATGCGACGCCGTTTCAGCCTTCGTTGGCTTCCTCTACACCTCGAGGTGCACGGAGGATGAGATGGACAAATACGGGATGCACCTGCTTGCACTCTCGCATGTGTACCTGGTCCCTCAGCTGAAACAGAGATGCATCAAGGGCTTATCACAGCGCTTGACCACAGAGAACGTGGTGGACGTGCTTCAACTCGCGAGGCTCTGCGACGCACCGGATCTCCATCTCCGCTGCATGAACCTCCTCACGAATCACTTCAAGGCCAGGAAAGTGAAATCGAGGAGGCATAGGGAAGAACAGGGGCTGTATTCGCAATTGAGTGAGGCGATGGAGTGTTTGGAGCACATTTGCACGGAGGGTTGCACAGAGGTTGGACCTTACCATGTGGAGGTTAACAGAGAGAGGAAACCGTGTAGTAGATTCTCCACGTGTCAAGGTCTTCAGCAACTGATTCGTCATTTCGCCACTTGTAAGAGGAGGATGAATGGAGGATGCTTGAGATGCAAGAGAATGTGGCAGTTATTCAGACTCCATTCCTATATTTGTCAACAAACTGATTCTTCTTGCAATGTTCCTCTTTGCAGGCAATTTCAATTGAGAATGCAGCAAGAGAAAAGGAAAGATGATTCAAGGTGGAAACTACTAGCGAAGAAAGTGGCCTCAGCCAGAGTCATGTCTTCCTTGTCTCTGCCAAAGAGGAAACGGGATGAAGAAACAAGAGTGGCGATAAACAATCCTGGGATTAGAAGTTTTAATTTACAATGA 963 0.4922 MGAQTIPIDFHNTRVLPDYDVFIHTSDGTRIPAHAAILASVSPVLENLIDRPRKHRSSERIIQIHGVPCDAVSAFVGFLYTSRCTEDEMDKYGMHLLALSHVYLVPQLKQRCIKGLSQRLTTENVVDVLQLARLCDAPDLHLRCMNLLTNHFKARKVKSRRHREEQGLYSQLSEAMECLEHICTEGCTEVGPYHVEVNRERKPCSRFSTCQGLQQLIRHFATCKRRMNGGCLRCKRMWQLFRLHSYICQQTDSSCNVPLCRQFQLRMQQEKRKDDSRWKLLAKKVASARVMSSLSLPKRKRDEETRVAINNPGIRSFNLQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi453g00046 320 SMART BTB_4 19 120 IPR000210 GO:0005515
Sebi453g00046 320 Pfam TAZ zinc finger 173 260 IPR000197 -
Sebi453g00046 320 SMART TAZ_2 166 261 IPR000197 -
Sebi453g00046 320 Pfam BTB/POZ domain 20 118 IPR000210 GO:0005515
Sebi453g00046 320 FunFam BTB/POZ and TAZ domain-containing protein 2 162 289 - -
Sebi453g00046 320 Gene3D Potassium Channel Kv1.1; Chain A 11 118 IPR011333 -
Sebi453g00046 320 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Sebi453g00046 320 CDD BACK 121 154 - -
Sebi453g00046 320 SUPERFAMILY TAZ domain 164 264 IPR035898 -
Sebi453g00046 320 Gene3D - 119 157 - -
Sebi453g00046 320 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 18 154 IPR044513 -
Sebi453g00046 320 SUPERFAMILY POZ domain 19 118 IPR011333 -
Sebi453g00046 320 Gene3D TAZ domain 161 296 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi453g00046 Sebi-Chr453 644019 647321 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Sebi453g00046 BTB 7.3e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi453g00046 - - cam:101496955 546.199