Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi453g00039 ATGGGTTTCATCCTCCTAGGAGGCAAGGCACTTAAGGGAATCAACTCAGAATTTAGTGATTCTCCGTTGAGGCTACAATACTACATAGTGATCACAGGAGCAACTTACTTCATGTTTTCATTCTTCATCCTAACAATATCTGCCATGAAAAATTGTTTGGGAGCTTCTGCGGTTGTCACCATCACATACATAGTATTGCTTCTTATTGTCTTAGTCAAAGATGTTGATTCAGAGTGGGGAGAAGGAGCGGCTAATGGAACTTTGAGTGGCTGGAAGAATGAAATGAAAGCCCTCTGCAGACTTTCATTGCCTTTGAGGAAGAACTCTAACATGGTCAGAAGCATTACTGCTAAGGAATGTTTCATGTGTGTAGCCTCTTGTTCACAGTTTCATCAATTAAGTGTTGAACCAGGTGACGTTCCACGGGTTGATGGGCAGTTGGCAGTGTTAAGGGCATTTGGTGACAAAAGCCTAAAGAAACATTTGAGCTCAGAACCATATGTGACAGTGGAGATAATAGATGATGATGCAGAGTTTGTTATATTAGCTTGTGATGGGTTATGGAAGATTTTAAAGGATGGGATGCAGCATGTAGGGAAGCTAATATGTAGTAATTGGGGTGCAAGAATGGATTCTGAGCCCAAACGTTGGAGACTATTTGCTGATGTGCTCTATGATTTAGGCATGGGCTTGGAAGTGCTTTCTCTCCACATCTTTTTCTTGAAATGGCAGGCCTAG 738 0.4187 MGFILLGGKALKGINSEFSDSPLRLQYYIVITGATYFMFSFFILTISAMKNCLGASAVVTITYIVLLLIVLVKDVDSEWGEGAANGTLSGWKNEMKALCRLSLPLRKNSNMVRSITAKECFMCVASCSQFHQLSVEPGDVPRVDGQLAVLRAFGDKSLKKHLSSEPYVTVEIIDDDAEFVILACDGLWKILKDGMQHVGKLICSNWGARMDSEPKRWRLFADVLYDLGMGLEVLSLHIFFLKWQA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi453g00039 245 Pfam Protein phosphatase 2C 135 193 IPR001932 -
Sebi453g00039 245 Gene3D - 124 229 IPR036457 -
Sebi453g00039 245 ProSiteProfiles PPM-type phosphatase domain profile. 1 245 IPR001932 -
Sebi453g00039 245 Pfam Vitamin B6 photo-protection and homoeostasis 188 236 IPR006968 -
Sebi453g00039 245 SUPERFAMILY PP2C-like 140 194 IPR036457 -
Sebi453g00039 245 PANTHER RUS1 FAMILY PROTEIN C16ORF58 189 236 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi453g00039 Sebi-Chr453 559261 563246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi453g00039 137 193 PP2C-type Phosphatase Gene Family AT3G15260 85.965 1.68e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi453g00039 K17506 - gmx:100783525 113.235