Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi453g00007 ATGGAATCGAAACCCACGCCTAGTAATGATACTATTAAATTCCTCTATAGCTACGGCGGCAAGATCCTTCCTCGCCGCACTGACAGCGAACTCCGATACTCCGGCGGCCACACCAGGGTCCTCGCCGTCCCTCGTTCAATTTCTTTCTCAGAGTTAATGGTGAAGCTTGGGGAATTATGTGGTTCGTCCGTCACCCTGAAGTGTCCATTGCCAAACGGAGACTTGGAAACCTTGATTTCTATCACCAGCGATGAAGATCTGACCAATATAATTGAGTTATACGATCGAGCTTCTTCATCGCTAGCTAGTCCCTTGAAAATCAAAGCCATTCTTTCGCAGCCTAAGTCTCTCAAGAAATTATCTTCTCCTCTGTCTTCTTCGTCCGGCTCCTCACACTCTTCATCCTGTTCGCCTCACGCCTCCGCTGATTCCCTGTATGCAGCACCGCATCTGTTCAACTGCCAGAAATTATCTCCTGTGCCGCTTGGGTATCCAATTGGGGTCGGTAACGGGACTGTGAAAGGCTGTTGGTACACGAGGCAATTTGGTGGAAGTCCAAGATACCTTCATCGTGGGCCTCACTGTAATAATTACTGTCACTGA 603 0.4876 MESKPTPSNDTIKFLYSYGGKILPRRTDSELRYSGGHTRVLAVPRSISFSELMVKLGELCGSSVTLKCPLPNGDLETLISITSDEDLTNIIELYDRASSSLASPLKIKAILSQPKSLKKLSSPLSSSSGSSHSSSCSPHASADSLYAAPHLFNCQKLSPVPLGYPIGVGNGTVKGCWYTRQFGGSPRYLHRGPHCNNYCH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi453g00007 200 CDD PB1_UP2 17 102 - -
Sebi453g00007 200 Pfam PB1 domain 31 99 IPR000270 GO:0005515
Sebi453g00007 200 SMART PB1_new 26 114 IPR000270 GO:0005515
Sebi453g00007 200 SUPERFAMILY CAD & PB1 domains 28 118 - -
Sebi453g00007 200 PANTHER OS05G0427100 PROTEIN-RELATED 6 130 - -
Sebi453g00007 200 Gene3D - 32 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi453g00007 Sebi-Chr453 109674 110687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi453g00007 13 92 MAP Kinase Kinase Kinase AT2G35050 50.000 3.68e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi453g00007 - - gmx:100815502 224.942