Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi451g00016 ATGGAAGGAGTTTCGCACAAGATCAGGCGCCAAATTGAGGAACTCGAGAGAATTTCCGGCGTGGAGAGCGGTGGCCTCACCGTCGATGGAGTGCCCGTTGATTCCTACTTAACTAGGTTTGTTTGGGATGAAGCCAAGTACCCGACTATGTCGCCTTTGAAGGAGATCGTGGATGGTATTCACAGTCAAGTGGCAAAGATTGAGGATGATCTCAAGGTTTCCATTTTCTTTCCACTCTTTAGTTTCAGGAATCTGTTAGATTTAGGAGATGGGTAG 276 0.471 MEGVSHKIRRQIEELERISGVESGGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHSQVAKIEDDLKVSIFFPLFSFRNLLDLGDG 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi451g00016 91 Gene3D - 1 78 - -
Sebi451g00016 91 Pfam V-ATPase subunit C 1 74 IPR004907 GO:0033180|GO:0046961|GO:1902600
Sebi451g00016 91 SUPERFAMILY Vacuolar ATP synthase subunit C 2 74 IPR036132 GO:0015078|GO:0033180|GO:1902600
Sebi451g00016 91 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 74 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi451g00016 Sebi-Chr451 266962 267312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi451g00016 1 75 Primary Pumps ATPases(2) AT1G12840 88.000 9.67e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi451g00016 K02148 - gmx:100813963 141.739