Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi451g00015 ATGGTTCGTGTTACTGAGTATAACAATATCCGCAGTCAGCTTAATGCTATCAACCGGAAGCAAACTGGAAGCTTAGCTGTCCGTGATCTTTCCAACTTGGTAAAACCTGAGGACATTATAACTTCAGAACATTTAACTACCCTCCTTGCAGTTGTTTCCAAGTATTCGCAGAAGGATTGGCTCTCAAGCTACGAAACATTGACAACCTATGTGGTTCCCAGGTCTTCTAAGAAGTTGTATGAGGATAACGAATATGCTCTTTATACTGTAACACTCTTCAACCGTGTTGCGGACAATTTTAGAGTTAGTGCACGGGAAAAAGGGTTCCAAATTCGTGATTTTGAATACAGTCCAGAAACACATGAGAATCGTAAGCAGGAGTTAGATAAATTGATGCAAGATCAGGAAAGTTTGAGGGGTTCTCTGTTGCAATGGTGCTATACCAGTTACGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCTGTACGTTTATTTGCTGAGAGCATTCTGAGATATGGTCTGCCTCCATCTTTCTTGGCATGTGTTTTAGCTCCATCTGTAAAAGCTGAGAAGAAAGTACGTTCTATCCTTGAAGGATTGAGTGATAGCACAAACAGGCAAGTGGCTTAA 633 0.4155 MVRVTEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEHLTTLLAVVSKYSQKDWLSSYETLTTYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRVSAREKGFQIRDFEYSPETHENRKQELDKLMQDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRLFAESILRYGLPPSFLACVLAPSVKAEKKVRSILEGLSDSTNRQVA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi451g00015 210 FunFam V-type proton ATPase subunit C 27 115 - -
Sebi451g00015 210 SUPERFAMILY Vacuolar ATP synthase subunit C 2 207 IPR036132 GO:0015078|GO:0033180|GO:1902600
Sebi451g00015 210 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 2 207 IPR004907 GO:0033180|GO:0046961|GO:1902600
Sebi451g00015 210 CDD V-ATPase_C 1 201 IPR004907 GO:0033180|GO:0046961|GO:1902600
Sebi451g00015 210 Gene3D - 4 131 - -
Sebi451g00015 210 Pfam V-ATPase subunit C 3 201 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi451g00015 Sebi-Chr451 262836 264565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi451g00015 2 206 Primary Pumps ATPases(2) AT1G12840 84.878 1.84e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi451g00015 K02148 - gmx:100813963 390.963