Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi451g00001 ATGTCTTCTGCCAGGATGAATCACTTTGATCAGTGGCTTGCAGATGATACTGGACGGTGCTTCATGAGAAAGTGGAAACCCGATGAGGATAAGTTATACTTCCCAAAAATTTGTTATCGAACCTGGGAAAGCATGATCGGAACTGATGTTAAACTTGAGGATCCTGTGCTGAATGTATTTAAGGTTACTATGTCTTCAGACTTGAACGGGATGAATGGAGGTAACTCTGATACAGATTCTAAACACCTTTGGAAGTCCGAAATTTCTGCCGCTTCATTAGTGAAAAGCCAACCTCTGGGTGTCCCGGCTTCTATTGCTAAAGATTATTTAAAAAAGAATCAAGAGTTTCTGCCTGTGATGTTGTCGGACGGGTCAACTGAGGATTGGCAACTAATTTGGAACAAATATCGCAAAAATCAAGTTCACCTTGGTAGTGGATGGTACAATTTCTCGAAAGAAAATGATCTGAAGGTTGGTGATAAGTTTATTTTCTGGGAAAATGTTGGACAACACGGTGTTGTAATGACTATTGATCGTTGCTAA 543 0.4015 MSSARMNHFDQWLADDTGRCFMRKWKPDEDKLYFPKICYRTWESMIGTDVKLEDPVLNVFKVTMSSDLNGMNGGNSDTDSKHLWKSEISAASLVKSQPLGVPASIAKDYLKKNQEFLPVMLSDGSTEDWQLIWNKYRKNQVHLGSGWYNFSKENDLKVGDKFIFWENVGQHGVVMTIDRC 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi451g00001 180 SUPERFAMILY DNA-binding pseudobarrel domain 93 167 IPR015300 -
Sebi451g00001 180 Gene3D - 75 179 IPR015300 -
Sebi451g00001 180 Pfam B3 DNA binding domain 90 165 IPR003340 GO:0003677
Sebi451g00001 180 ProSiteProfiles B3 DNA-binding domain profile. 84 180 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi451g00001 Sebi-Chr451 26001 26935 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi451g00001 B3 2.1e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi451g00001 - K01530 mtr:120577830 90.8929