Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi450g00006 ATGAATGATATACGATTTATGAAACGCGTTAGACTACAGAAAATTGAATGGGCACTAAGGATAAAGGGTGTGGAATATGAGTATATACAAGAAGATTTAGCAAACAAGAGTCCTTTGCTTCTTCTGTCCAACCCTGTTCACAAGAAAGTTCCAGTGCTTCTACATGATGGCAAGCCAATTGCTGAATCACTTGTCATCCTTGAGTATATTGATGAGACATGGAAGGAGAACCCTTTACTACCATTAGACCCATATGAGAAGGCACAGGCTCGTTTCTGGGCAAAGTTTATTGTTGAGAAGTGTGTGCTTGGTGTATGGGGAGCTTGTGTGGCCCAAGGAGAAGAGAAGGGGAAAGCTGTAGATGCTGCATTAGAGTCACTGGCATTTCTTGAAAAACAAATTGAAGGGAAAAAGTTTTTTGGTGGAGAGAAGATAGGATATCTTGACATTGTAGCTGGCTGGATACCTCATTGGCTCAATGTCCTGGAAGAACTTGGGGACATTGAACTTCTCAATGCTGAGAGGTTCCCATGTCTTCATGATTGGGGACAGAACTTCATCCAGACTTTACCTGTCAAAGATTGCATTCCACCCAGGGAAATGGTGGTTGAATATTTCAGCTTTGGCATCAACTATGTGCGTTCCTTGGCATCTAATAAACCATGA 666 0.4204 MNDIRFMKRVRLQKIEWALRIKGVEYEYIQEDLANKSPLLLLSNPVHKKVPVLLHDGKPIAESLVILEYIDETWKENPLLPLDPYEKAQARFWAKFIVEKCVLGVWGACVAQGEEKGKAVDAALESLAFLEKQIEGKKFFGGEKIGYLDIVAGWIPHWLNVLEELGDIELLNAERFPCLHDWGQNFIQTLPVKDCIPPREMVVEYFSFGINYVRSLASNKP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi450g00006 221 CDD GST_C_Tau 84 208 IPR045074 GO:0004364|GO:0006749
Sebi450g00006 221 SFLD Main (cytGST) 13 207 - -
Sebi450g00006 221 Gene3D Glutaredoxin 4 79 - -
Sebi450g00006 221 SFLD Main.3: Omega- and Tau-like 13 207 IPR045073 -
Sebi450g00006 221 Gene3D - 80 214 - -
Sebi450g00006 221 Pfam Glutathione S-transferase, N-terminal domain 10 72 IPR004045 -
Sebi450g00006 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 204 IPR045073 -
Sebi450g00006 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 83 205 IPR010987 -
Sebi450g00006 221 Pfam Glutathione S-transferase, C-terminal domain 114 188 IPR004046 -
Sebi450g00006 221 FunFam Tau class glutathione S-transferase 80 215 - -
Sebi450g00006 221 SUPERFAMILY Thioredoxin-like 13 99 IPR036249 -
Sebi450g00006 221 SUPERFAMILY GST C-terminal domain-like 72 208 IPR036282 -
Sebi450g00006 221 CDD GST_N_Tau 6 74 - -
Sebi450g00006 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 78 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi450g00006 Sebi-Chr450 201318 203033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi450g00006 13 206 Glutathione S-transferase Gene Family AT2G29420 47.423 4.27e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi450g00006 K00799 - gmx:547587 340.887