Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi450g00003 ATGCGTAGTTTTATGCTGGTAACATTCAATGTTTGGCGTTCAACTGTAGCATTTGTTGGAGTTTCAAATTTTAATGAAAGTGGGACAGCTTGTCAGACACAAGAGTCATTTATCCACAATGATGGACAAGGAATACAGGGTGGTTGCAATGATTGTCATGTTCCGTGTGAGCATATGGATGAGAATGAGGATAATGAATCTGCTAGTTTTCATGGTGAAGGAGAAAGTACTGGATTTGGCTCAAACGACAAAGATAATGAGATGAATAATAGTGAAGGTGAAGGGGAGTCTAGTGATGAAGATGGTGAACATGATTCCAATGATAGGAATGACATTCCCATTGAAAGTGAAGAGGAATTTGGAAATATTAACTTCAAGAGCTTAACATCGAGTGATCTAATGAAGTACCACTTTCCTGATCGTGAGGTTGCTTTCGATTTCTATAGTTGGTATGCAAGATTCCATGGCTTCGCCGCTCGGAAGGACAGGACAGTGCATAATAAGAAGGATGAAGTAATTCAACAAACTTTTGTTTGCTACAGGGAAGGTGGAAAAATACCCAACCAAAGACCTTTGAAGCGTGCCCCTAGGAAGAAAACGAGGTGTGGATGCCTAACTAGTTGTCAAGTGCACATATGGTCTGCCAATAACCGGTGGTATTTTAAAAAATTGTTAGAAGAACATAATCATATGTTGTTGGAAGAAAAGTATGTCGGGCTCCGGGCTTCTCATAGGAAGATGAGTGAAGATGATGTAGTCCAAATGATGAACATGCAAAAGGTGGGGATTAGGACTCCACACATATATGGTTCGTTTGCTAGCCAAATGGGAGGATATGAAAATGTTAGATTCAGGAAAAAGGACATATACAATGAAGTAGACAAGCTTAGGCGGAAGAAAGGGTCAAATGCGACAATTGCTTTGTCATACTTACAACGTTTGAAAAGGACTGATCAAGCATTGTATTGGAGGCACACTTCTGGTGAGCATGGTAGGCTACAACACCTTTTCTGGTCTGATGGACGATGCCAATATGATTATCATGTTTTTGGAGATGTTTTGGCATTTGATGCCACTTACAAGAAGAACAGATATAGTTGTCCCATGGTAGTATTTTTCGGAGTTAATCATCATAACCAAACCATTGTTTTTGGGTGTGCTGTAGTATCGAATGAGACGGAAGAAACGTATGTATGGGTGCTAGAACAATTTCTGCATGCAATGAAAGGGAAGGTGCCTGTCTCAGTTATAACTGATGGTGACTTAGCTATGAGAAATGCAATTAGAAGAGTATTTGCTAGTGCACACCATAGGTTATGTGCATGGCACCTTTTACGGAATGCTTTAAGCAATTTTCACAACACCCGCTTCACCCAGTTGTTTGAGGAATGCATGCTTGGGGATTAA 1407 0.4023 MRSFMLVTFNVWRSTVAFVGVSNFNESGTACQTQESFIHNDGQGIQGGCNDCHVPCEHMDENEDNESASFHGEGESTGFGSNDKDNEMNNSEGEGESSDEDGEHDSNDRNDIPIESEEEFGNINFKSLTSSDLMKYHFPDREVAFDFYSWYARFHGFAARKDRTVHNKKDEVIQQTFVCYREGGKIPNQRPLKRAPRKKTRCGCLTSCQVHIWSANNRWYFKKLLEEHNHMLLEEKYVGLRASHRKMSEDDVVQMMNMQKVGIRTPHIYGSFASQMGGYENVRFRKKDIYNEVDKLRRKKGSNATIALSYLQRLKRTDQALYWRHTSGEHGRLQHLFWSDGRCQYDYHVFGDVLAFDATYKKNRYSCPMVVFFGVNHHNQTIVFGCAVVSNETEETYVWVLEQFLHAMKGKVPVSVITDGDLAMRNAIRRVFASAHHRLCAWHLLRNALSNFHNTRFTQLFEECMLGD 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi450g00003 468 MobiDBLite consensus disorder prediction 71 86 - -
Sebi450g00003 468 Pfam FAR1 DNA-binding domain 146 233 IPR004330 -
Sebi450g00003 468 MobiDBLite consensus disorder prediction 60 118 - -
Sebi450g00003 468 PANTHER OS01G0519700 PROTEIN 135 464 - -
Sebi450g00003 468 MobiDBLite consensus disorder prediction 102 116 - -
Sebi450g00003 468 Pfam MULE transposase domain 353 447 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi450g00003 Sebi-Chr450 90204 91923 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi450g00003 MULE 3.8e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi450g00003 - - vvo:131649305 430.254