Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi44g00081 ATGGCTCTGGAACTTGTTGCTGGACCTTTAATGGGAGCTGTTTTCAATGTATTGCTGGATAGGATAGCTTCTTCTGAGATTGTCAACTTCTTTAAGAAGAAGAAAAATGACAAGTTGCTCAAAAGGTTGAAGATCATCTTGTTGTCTGTCCATGCTGTGCTCAATGATGCAGAGGAAAAGCAAATGAAAAATGAAGCAGTGAAGGAGTGGCTTGAGGAACTTAAAGATGTGGCATTTGATGCTGATGATCTACTTGATGAGATCTACACTGGAGAAAAAATCAAGGCAAAAGAGGTAAACACTCTCCATTCCACTCTTATGAATGTTTATGATAATGAGCTTGAACAGAAAATTGAAGATGTTCATGAAAGATTAGAGTTTATTATAAATCAGAAAGAAGTACTTGATTTGAGGGTAGGTAAGGAAGTGAAAATGGCACACAAGACACCAACCTCATCTTTGATAGAAGAACGTGATGTGTATGGAAGGGATAATGATAAGGAAACCTTAGTTAACTTGCTTTTGACACATGATGCTGATGATGAAAAAATAGGTGTCATTCCCATTGTTGGAATGGGAGGAATTGGAAAAACCACCTTAGCTCAACTAGTATACAATGATCATAGGAGGAATCTGAAAATGTATCTCCTGAAGAAAAAGTTTTTGTTTGTGTTTGATGACGTTTGGAATGAAAATTATGATAATTGGGACAAATTCAGGAGTCCATTTAAACATGCAGGGGCTAATGGAAGTAAGATTGTTGTAACTACTCGAAGTGGGTATGTTGCATCCATCATGCAAACAATTCCACCTTATAATCTCAGTGAATTGTCCAATGAAGATTGTTGGGATTTGTTTTCAAAGCATGCTTTTGATTATGGGGATTCAAATGTTCATCAAAGTGTGGAAAAAGTTGGAAGAGAAATAGTTAGAAAGTGCAAAGGATTGCCTCTGGCTGTGAAGACACTTGCAGGACTTTTGAGGTCTAAAAGTGATATGCAAGAATGGTATAAAGTACTGAACAGTGAGATATGGGATCTGCAAGATCATGAGAGTAATATTCTTCCAGCTTTGAGATTAAGTTACCATTACCTCCCTTCTCATTTAAAGAGGTGTTTTGCTTATTGTGCAATTTTCCCAAAAGATTATGAATTTGAAAAGGAGAACCTGATTTTGTTATGGATGGCAGAAGGTTTGCTCCAACAATCAAAGAGACATAGAAGAATTGAAGAAGTTGGAAATGAGTATTTTTGTGAATTAGTATCCAGATCATTTTTCCAACAATCAAGACGTGGCAAGTCATGTTTCTTAATGCATCATCTCATAAATGACTTAGCTCAGTTTGTTTCTGGAACATTTTCTGTCAAAATGGAAGGTAACAATTCTAATGAAATTGAGGAAAGAACTAGACATTTGTCCCACATTATTGCTCATAGTTCCTCATATGTAAACCTGAAAGATGTTAGCAAAGCAAATCACCTACGCACCTTTCTGCAAATAAGAACAATAGGTACATCCATTGACTTGTTCAACAACATGCCAAATGATCTGTTGACAAAGTTAAGGTACCTAAGGGTGTTATCTTTGGTAGGTGCATATTTCTATAGTTTACCTGATTCAATAGGTGAACTAAAACATCTGCGCTATCTAGAAGTGTTTGACACTGAGATTATCAGGTTACCTGAATCCATCTGCAGTTTGTACAATTTACAAACTCTGAAGTTAGTTGGATGTTATAAACTTATGGAACTGCCAACAGATATTCATAAACTTGTCAACTTGCGCTACTTGGATATTAGAGGCACTTGTTTGAAGTGGATGCCATTGCAAATCAGTGAGTTAAAAAGCCTCCAAAAGTTGAGTGACTTTTTTGTAGAAGAAGATTATGGATCTTCCATTGGTGAATTGGGAGAGCTATCTAATTTACATGGAGCATTGTTCATCCATTACATAGAAAATGTTGTTAATCACAAGGATTCTGAGAAGGCAAAGTTGAAGGAAAAGGATGGCCTTGAAAAGTTGTCTTTGGATTGGGGTGGGAATGGTGATACTGAGAACACAAAGCATGAAAAAGCCATACTAGACAGCCTGCAACCTCATACTAACTTGAAGGAGCTTGATATCTATGAGTATCCAGGCACAGAATTTCCAAATTGGTTGGGGGACTACTCCTTTTGCAACTTGGTGTCCTTACAACTTAAGGGCTGCAAATATTGCTATAAATTGCCTCCACTTGGACAACTTCCAATGTTGAAAGAGCTTCAGATTATTAAATTTGAAGGATTAGTGAATGTGGGGTCTGAGTTTTATGGAAATAGAACTTCTGTAGCTGATGAGAGGTACTTTCCTGCACTGGAAATTCTAAGGATTGAGTGTATGTCATCATGGGAGAAATGGTGTTCTGATGCTGAAAATGCAGGCAGTAGAGCTTTCTGTCACCTTAGAGAGCTTTATATTGAAAGCTGTCCCAAGCTGACAGGGGATTTACCATGTAACCTTCCATCTTTGACATTACTTGTAATCAGAGATTGCAAACGTTTGCTTTGTTCACTTCCCAAAGCTCCACTTCTGCGTGTGCTAAACATTCAGAATTGTGAGAAGCTAGAATTCCCAGTACATGCACCTTGGTATCACCAATCACTGACATCTTTGTACTTACATGATAGCTGTGACTCACTAATGTTCTTGCCATTAGATCTCTTCCCCAATCTCAAGTCTCTAGATATTTGGGGATGTAAAAATCTTGAAGCACTTACTGTTTCAGAATCAGATTCAACTCCTCAAAATCTCAAATCCCTTCATTCATTGTGCATAAGGCATTGTCCAAATTTCATATCATTTCCCAAGGGAGGATTTGAAGCCCCAATGCTCACTTTATTAACCATCAACTACTGTGAGAAGTTGAATTCTCTGCCTGAAAAAATGCATGACCTTATGCCAAGCTTGAAAGAACTTCAACTGAGGGGTTGTCCACAAATTGAGTCATCTACTATGAGGCCACTCAGGATTCGGATTTGCAACAAACTCATGGAAGGGAAACAAAACCACTCTGATCCTCTCTTTGCAAGGTTGAAGGGTCTGGCCTCTATTCATAGTCCCTCATCAAGTTAG 3111 0.3783 MALELVAGPLMGAVFNVLLDRIASSEIVNFFKKKKNDKLLKRLKIILLSVHAVLNDAEEKQMKNEAVKEWLEELKDVAFDADDLLDEIYTGEKIKAKEVNTLHSTLMNVYDNELEQKIEDVHERLEFIINQKEVLDLRVGKEVKMAHKTPTSSLIEERDVYGRDNDKETLVNLLLTHDADDEKIGVIPIVGMGGIGKTTLAQLVYNDHRRNLKMYLLKKKFLFVFDDVWNENYDNWDKFRSPFKHAGANGSKIVVTTRSGYVASIMQTIPPYNLSELSNEDCWDLFSKHAFDYGDSNVHQSVEKVGREIVRKCKGLPLAVKTLAGLLRSKSDMQEWYKVLNSEIWDLQDHESNILPALRLSYHYLPSHLKRCFAYCAIFPKDYEFEKENLILLWMAEGLLQQSKRHRRIEEVGNEYFCELVSRSFFQQSRRGKSCFLMHHLINDLAQFVSGTFSVKMEGNNSNEIEERTRHLSHIIAHSSSYVNLKDVSKANHLRTFLQIRTIGTSIDLFNNMPNDLLTKLRYLRVLSLVGAYFYSLPDSIGELKHLRYLEVFDTEIIRLPESICSLYNLQTLKLVGCYKLMELPTDIHKLVNLRYLDIRGTCLKWMPLQISELKSLQKLSDFFVEEDYGSSIGELGELSNLHGALFIHYIENVVNHKDSEKAKLKEKDGLEKLSLDWGGNGDTENTKHEKAILDSLQPHTNLKELDIYEYPGTEFPNWLGDYSFCNLVSLQLKGCKYCYKLPPLGQLPMLKELQIIKFEGLVNVGSEFYGNRTSVADERYFPALEILRIECMSSWEKWCSDAENAGSRAFCHLRELYIESCPKLTGDLPCNLPSLTLLVIRDCKRLLCSLPKAPLLRVLNIQNCEKLEFPVHAPWYHQSLTSLYLHDSCDSLMFLPLDLFPNLKSLDIWGCKNLEALTVSESDSTPQNLKSLHSLCIRHCPNFISFPKGGFEAPMLTLLTINYCEKLNSLPEKMHDLMPSLKELQLRGCPQIESSTMRPLRIRICNKLMEGKQNHSDPLFARLKGLASIHSPSSS 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi44g00081 1036 Gene3D - 141 212 IPR027417 -
Sebi44g00081 1036 Gene3D - 213 269 IPR027417 -
Sebi44g00081 1036 Pfam NB-ARC domain 210 343 IPR002182 GO:0043531
Sebi44g00081 1036 Pfam NB-ARC domain 167 209 IPR002182 GO:0043531
Sebi44g00081 1036 PRINTS Disease resistance protein signature 186 201 - -
Sebi44g00081 1036 PRINTS Disease resistance protein signature 899 915 - -
Sebi44g00081 1036 PRINTS Disease resistance protein signature 313 327 - -
Sebi44g00081 1036 Gene3D Ribonuclease Inhibitor 857 1011 IPR032675 -
Sebi44g00081 1036 Gene3D - 13 127 - -
Sebi44g00081 1036 SUPERFAMILY RNI-like 781 996 - -
Sebi44g00081 1036 Pfam Rx N-terminal domain 11 90 IPR041118 -
Sebi44g00081 1036 Gene3D - 276 360 IPR042197 -
Sebi44g00081 1036 PANTHER DISEASE RESISTANCE PROTEIN RP 42 796 IPR044974 GO:0006952
Sebi44g00081 1036 Coils Coil 111 131 - -
Sebi44g00081 1036 FunFam Probable disease resistance protein At1g63360 362 448 - -
Sebi44g00081 1036 Gene3D - 361 448 IPR036388 -
Sebi44g00081 1036 Gene3D Ribonuclease Inhibitor 482 845 IPR032675 -
Sebi44g00081 1036 FunFam Probable disease resistance protein At5g66910 276 361 - -
Sebi44g00081 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 376 IPR027417 -
Sebi44g00081 1036 SUPERFAMILY L domain-like 438 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi44g00081 Sebi-Chr44 1955987 1959228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi44g00081 524 633 WRKY Transcription Factor Family AT4G12020 35.088 7.20e-07 51.6