Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi44g00078 ATGAGGAGAAAAGAGCGAAGGTTAGGGTTCAGGATTCCCCCTCCGACGAGGACTGGCTTCGAAGCGAGGTTCGTGAAGGAGAAGACGTTGTCGCGGTACGCGTCGGAGATCGACGGCGAGTGTATGCCGGTCACCGCGCCCAACGGGAACAGGGTTTACGCCAAGCTGAATCGGTTCCGAGGAGAAGAGCGAGTGACGAAGCTGGATTGCATAGGATATTCTTCTGATCTTGGTTTAGAACCGATAAATATTCTATTTGAAAAGTTGGAGCAAGAGACTTTTGCTAAGACTTTGCAAGCTAGTTCTGAATGCCAAAGTGTTCTTGATGATCCTGAAACACGAACAATTGTCCATGAACAACTTTGGGTGGATAAATATGCTCCCAAGTCATTTACTGAGCTTCTTAGTGATGAACAGACAAATCGTGAGGTACTCTTGTGGTTGAAACAATGGGATTCTACTGTGTTTGGATCTGAAATTCGAAGTACATCAGAAGATGTTTTGTCTGCTTTGAAACGACATTCTTCTATTGCCCAAAATCAGAAACCTTTGGATTCAAAGTTTCCAAGGACAAACAAAGGTTCCAAATGGAGTAGTAGGAGGTATATGGATTCTAGAAGTAAGGATGAGAGTGGTAATTCAAAGAGTATTCAGGATATCTGGAACACGAAGTCAAGGAATATTGGTCCACCAGAACAGAAGCCAGCTGGTCTTACACAGATGTGCTTGAGGATCCTTCTTCTCTGTGGACCACCAGGTCTTGGAAAAACAACACTTGCACATGTAGCTGCTAGGCATTGCGGATATCATGTGGTGGAGGTTAATGCTAGTGATGATCGTTCTACATCAACAATTGAAGCAAAAATCCTTGATGTGGTTCAGATGAACTCTGTCTTGTCTGATTCAAGGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCTCTTGGTGATGGCAAGGGTGCTGTGGAGGTTCTTTTAAAGATGATTTCTGCTGAAAGGAAGCCTGATGCAGGAAAGCAAAGTTTGGGCAAAGGACAACCGGAAAGGAAATCTTCAAAGAAGGGTCGGAAAACAGCGTCACTGTCAAGACCTGTGATTTGCATATGTAATGACCTATATGCACCAGCCTTAAGACCATTACGTCAGGTAGCCAAGAAAGTTAACCGATACATCTGA 1179 0.4427 MRRKERRLGFRIPPPTRTGFEARFVKEKTLSRYASEIDGECMPVTAPNGNRVYAKLNRFRGEERVTKLDCIGYSSDLGLEPINILFEKLEQETFAKTLQASSECQSVLDDPETRTIVHEQLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSTVFGSEIRSTSEDVLSALKRHSSIAQNQKPLDSKFPRTNKGSKWSSRRYMDSRSKDESGNSKSIQDIWNTKSRNIGPPEQKPAGLTQMCLRILLLCGPPGLGKTTLAHVAARHCGYHVVEVNASDDRSTSTIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKGAVEVLLKMISAERKPDAGKQSLGKGQPERKSSKKGRKTASLSRPVICICNDLYAPALRPLRQVAKKVNRYI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi44g00078 392 MobiDBLite consensus disorder prediction 179 196 - -
Sebi44g00078 392 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 24 386 - -
Sebi44g00078 392 SMART AAA_5 242 389 IPR003593 GO:0016887
Sebi44g00078 392 MobiDBLite consensus disorder prediction 179 217 - -
Sebi44g00078 392 MobiDBLite consensus disorder prediction 336 359 - -
Sebi44g00078 392 CDD AAA 244 335 - -
Sebi44g00078 392 Gene3D - 119 390 IPR027417 -
Sebi44g00078 392 Pfam ATPase family associated with various cellular activities (AAA) 246 362 IPR003959 GO:0005524|GO:0016887
Sebi44g00078 392 MobiDBLite consensus disorder prediction 197 213 - -
Sebi44g00078 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 374 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi44g00078 246 323 Core DNA Replication Machinery Family AT1G21690 37.209 3.94e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi44g00078 K11269 - gmx:100785041 603.208