Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi44g00076 ATGCCTTACGTCGACTGCTGCAAACGTTTGCACACATTTAACGTTGGGAATCTGGTTCTTCCAGCAAGAAAGGGGAAACATGATGATGAAGCACACATTGGTTCAACAAAGAAGGCGTGCAGCAATGAAGTGGATAGAAGGTGGGGTTACTCAACAGAGTTGATGCTGTATGATGACCCTTGGAAGATCAAGAAAGTCCTCAAAGAGAGTGATCTTGGCAACATGAGCAGACTCTTGCTGGGAAGAGATTTGGCACAAGAATTGGTGCTGCCTGTGTTGGGTGCTAATACTGATCTTGACAATGGAACTCAAGTCTCGATTTGGGATGTTGACACCAACTCCATGCACTCTCTGCTTTTCAAGAAATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGTAGCTGGGTCCAAGATTTTGTCATTAGAAGAGCCTTAAAGAAAGGAGATGAGATTGGCCTTCACTAG 465 0.4409 MPYVDCCKRLHTFNVGNLVLPARKGKHDDEAHIGSTKKACSNEVDRRWGYSTELMLYDDPWKIKKVLKESDLGNMSRLLLGRDLAQELVLPVLGANTDLDNGTQVSIWDVDTNSMHSLLFKKWVSSRSYVFIGSWVQDFVIRRALKKGDEIGLH 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi44g00076 154 CDD B3_DNA 61 154 IPR003340 GO:0003677
Sebi44g00076 154 Gene3D - 60 154 IPR015300 -
Sebi44g00076 154 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 35 153 - -
Sebi44g00076 154 SUPERFAMILY DNA-binding pseudobarrel domain 59 152 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi44g00076 Sebi-Chr44 1828417 1828974 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi44g00076 45 154 B3 DNA Binding Superfamily AT3G24650 30.909 7.64e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi44g00076 - - lang:109331497 170.244