Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi44g00059 ATGTCTATGCTGTGTTTTGAAGTTCGTAGAGGGTTTTGTTTCGTCAAATCGTGTGGGTTATTTCACATGAGTCTTGGTGCTCTGCTGAACGAGATTGCTCGTCTCAGAAGGAGCCACTGGCAAGTAGTTATTTCACATGCGTTCCGCGAATTGCAGATTGTCACTGGTTCGAAAACAGTTCATCAGAGCGAAGCAAGGATGTCAAAGAGAAAGGTTAGAGAGCCCAAGGAGGAAAATGTCACCCTTGGTCCTGCGGTAAAAGATGGTGAGCATGTTTTTGGCGTGGCTCGCATTTTTGCATCTTTTAATGACACCTTCATTCATGTCACTGATTTGTCTGGAAGGGAAACTCTTGTCCGCATTACTGGTGGAATGAAGGTTAAAGCTGACAGAGATGAGTCATCTCCATATGCTGCTATGCTTGCAGCACAAGATGTTGCTGCCAGATGCAAGGAGTTGGGCATAACTGCTCTTCATATCAAGCTCCGTGCAACAGGAGGAAACAAGACAAAAACACCTGGTCCTGGTGCTCAGTCTGCTCTCCGTGCCTTGGCTCGGTCTGGGATGAAAATTGGCCGCATAGAGGATGTGACCCCAATTCCTTCAGATAGCACACGTAGAAAGAGTGGTAGAAGGGGTAGAAGGCTTTGA 651 0.4685 MSMLCFEVRRGFCFVKSCGLFHMSLGALLNEIARLRRSHWQVVISHAFRELQIVTGSKTVHQSEARMSKRKVREPKEENVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi44g00059 216 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 69 209 IPR001971 GO:0003735|GO:0005840|GO:0006412
Sebi44g00059 216 MobiDBLite consensus disorder prediction 196 216 - -
Sebi44g00059 216 SUPERFAMILY Translational machinery components 89 214 - -
Sebi44g00059 216 ProSitePatterns Ribosomal protein S11 signature. 181 203 IPR018102 -
Sebi44g00059 216 Hamap 30S ribosomal protein S11 [rpsK]. 58 213 IPR001971 GO:0003735|GO:0005840|GO:0006412
Sebi44g00059 216 FunFam 40S ribosomal protein S14 67 216 - -
Sebi44g00059 216 Gene3D Ribosomal protein S11 67 216 IPR036967 GO:0003735|GO:0005840|GO:0006412
Sebi44g00059 216 Pfam Ribosomal protein S11 94 212 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi44g00059 Sebi-Chr44 1516778 1518947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi44g00059 67 205 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 90.647 1.40e-91 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi44g00059 K02955 - gmx:100786325 265.774