Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi44g00045 ATGTCTGGGAACATCAAGGAGGGGAGAGCTTTGGCAAAAGGGTGTTTTGTTATTTTACTTCTATTGATTTTACTTCTTTGTAACACAGAGGGGTTGAATACAGAGGGGCAAATCCTCCTAGAGCTTAAGAATGGACTTCATGATGAACTTAATCTTTTGGGAAATTGGAAGTCTACTGATGAAACCCCATGTGGATGGACAGGTGTAAATTGCAGTTATGAATATAGCAGTAATAACAATCCAGTGGTGGTGTCTCTTAATTTGAGTTCTATGGGTCTTTCAGGAACTCTAAATGCTAGCATTGGGGGTCTGACCCATTTAACTTATCTCAATCTTGCTTACAATGATCTGATTGGAAATATCCCCAAGGAGATTGGTGAGTGCTTGAGTTTGGAGTATCTTTACTTGAACAATAACCATTTTGAGGGACCAATTCCTTCTGAATTGAGTAAGCTTTCTGTCTTGAGAAATTTGAATATTTGCAACAATAAACTCTCTGGTGTTATTCCAGATGAGTTTGGAAACTTGTCTTCATTGGTTGAATTAGTGGCCTATAGCAACTTCCTTGTTGGCCCCCTGCCTAATTCCATTGGAAATCTTAAGAATCTTGCTTCTTTCAGAGCTGGGGCAAATAACATTACAGGTACCTTGCCAAAGGAAATTGGCAGATGTAAGAACTTGATACGTCTTGGTCTTGCTCAAAATCAGATAGGAGGGGAGATACCAAGTGAGATTGGGATGCTCAGCAGCTTAAAGGAGCTGATTTTATGGGAAAACCAGTTTTCAGGACCTATTCCTAAAGAGCTTGGAAACTGTAGCAGTCTTGAGACCCTTGCTTTATATGGCAATAATCTTATTGGACCTCTACCTCCAGAGATTGGGAACCTCAAATCATTGAAGTGGTTGTATCTTTACAGAACTAAGTTGAATGGGACCATTCCAAGGGAAATTGGAAATCTTTCTTCAGCTATAAACATTGATTTCTCAGAGAACTCTTTAGTAGGTGATATCCCTTCAGAGTTCAGCAAAATAAGTGGTCTAAGTTTGCTCTTTCTCTTTGAGAACCAGCTAACTGGTGTTATACCAGATGAGTTTAGTAACTTGAAGAACCTTACAAAGTTAGACCTGTCACTGAATCATCTTACAGGTTCAATTCCACTTGGCTTCCAATACTTGACTCAAATGTTTCAGTTGCAACTTTTTGACAACTCCCTAAGTGGTATTATTCCTCAGGGACTTGGACTTCACAGTCCTCTTTGGGTGGTTGATTTTTCTGACAACAAATTGACAGGAAGAATACCTCCTCATCTCTGCAGAAATTCTCGCTTGATGTTATTGAATCTGGCAGGTAATCAACTTTATGGAAATATACCCACAGGGATATTGAACTGTGAATCATTGGCACAATTGGTGTTAACTGGAAACAGGCTTACTGGTGGCTTCCCTTCAGAATTGTGTAAACTGGAGAACCTTACTGCCATTGATTTGAATGAGAACAGGTTCAGTGGTCCACTTCCTCCTGAGATTGCAAACTGCCACAAATTGCAAAGGCTTCATATTGCAAACAATTACTTCATATCCAATTTGCCTAAGGCAATAGGAAATCTCTCTCAATTGGTGACTTTTAATGTTTCATCAAATCTTTTCACTGGAAGAATCCCACCTGAAATTTTTTGGTGCCAAAGGCTCCAGAGGCTTGATCTCAGTCAGAATAGCTTTACTGGTTCCTTGCCAAGTGAGATTGGAACACTTCAGCACTTGGAGATTCTCAAGCTCTCAGACAATAAGCTGTCTGGATACATTCCTGCATCCTTAGGTAATCTGTCTCATCTGAACTGGTTGCTGATGGGTGGAAATTTGTTTTCTGGTGAAATACCTTCCCATTTGGGTTCTCTTTCAAGTTTACAGATTGGAATGGATCTCAGTTACAATAATCTTTCTGGAAGAATACCATCTCAGCTTGGCAATCTCAATATGCTTGAATATCTCTTGCTCAATAACAACCATTTGGATGGTGAAATTCCCAGCACCTTTGCAGAACTTTCAAGCTTGTTGGGGTGTAATTTCTCATACAATAACCTCTCTGGACCTATACCTTCCACTAAAATTTTCCAAAGTATGGATGTGAGCAGCTTTATTGGTGGTAATAAAGGCCTTTGTGGTTCACCTCTCGGTGACTGCAACACCAATCCAGCTTCTCACTCTGATCCTTCAGGGGAAAGTGTTGAGTCTCCTCGTGCTAAAATTGTCATGATCATTGCAGCTCTTGTTGGTGGTGTTTCTCTCATTTTGATTATAGTTATTTTGTATTATATGAGACGTCCTAGGGAGTCTGTTGATTCCTTTAGAGACACTGAGAGTCCCTCCCCAGATTCTGATATCTATTTCCCTCCAAAGGAAGGTTTCACATTTCAAGATCTAATTGAAGCTACAAAAAGATTTCATGAAAGTTATGTTATTGGTAGAGGAGCATGTGGAACAGTTTATAAGGCAGTGATGAAATCTGGTAAGACAATTGCTGTTAAGAAGTTAGCATCCAACAGGGAAGGGAACAACATTGAGAATAGTTTCAGGGCTGAAATATTGACTCTGGGAAGGATAAGGCATAGGAATATAGTGAAGTTGTATGGCTTTTGCTATCACCAAGGTTCCAATCTCCTTCTTTATGAGTACATGGAAAGGGGTAGCTTAGGTGAACTATTACATGGTTCTGCAATTGCTGGATCTTATGGGTATATTGCTCCTGAATATGCATATACCATGAAGGTGACAGAAAAGTGTGACATATATAGTTATGGTGTTGTGCTCTTGGAATTGCTAACTGGAAGAACACCAGTTCAGCCACTGGAGCAAGGAGGTGATCTTGTCACATGGGTAAGAAACCATATCCGGGAGCATAACAATACATTGACATCAGAGATACTTGACAGCCGTGTGGATCTTGAAGACCAAATCACCACAAATCACATGCTCACTGTTTTGAAACTTGCTTTAGTCTGCACAAGTATGTCTCCTTCTAAGAGGCCATCAATGCGGGAAGTTGTGTCCATGCTCATTGAGTCTAATGAGAAAGAAGGAAACTTAACACTCACTCAAACATACCATGATCTTCCTACCAAAGATGGCATATGA 3132 0.4001 MSGNIKEGRALAKGCFVILLLLILLLCNTEGLNTEGQILLELKNGLHDELNLLGNWKSTDETPCGWTGVNCSYEYSSNNNPVVVSLNLSSMGLSGTLNASIGGLTHLTYLNLAYNDLIGNIPKEIGECLSLEYLYLNNNHFEGPIPSELSKLSVLRNLNICNNKLSGVIPDEFGNLSSLVELVAYSNFLVGPLPNSIGNLKNLASFRAGANNITGTLPKEIGRCKNLIRLGLAQNQIGGEIPSEIGMLSSLKELILWENQFSGPIPKELGNCSSLETLALYGNNLIGPLPPEIGNLKSLKWLYLYRTKLNGTIPREIGNLSSAINIDFSENSLVGDIPSEFSKISGLSLLFLFENQLTGVIPDEFSNLKNLTKLDLSLNHLTGSIPLGFQYLTQMFQLQLFDNSLSGIIPQGLGLHSPLWVVDFSDNKLTGRIPPHLCRNSRLMLLNLAGNQLYGNIPTGILNCESLAQLVLTGNRLTGGFPSELCKLENLTAIDLNENRFSGPLPPEIANCHKLQRLHIANNYFISNLPKAIGNLSQLVTFNVSSNLFTGRIPPEIFWCQRLQRLDLSQNSFTGSLPSEIGTLQHLEILKLSDNKLSGYIPASLGNLSHLNWLLMGGNLFSGEIPSHLGSLSSLQIGMDLSYNNLSGRIPSQLGNLNMLEYLLLNNNHLDGEIPSTFAELSSLLGCNFSYNNLSGPIPSTKIFQSMDVSSFIGGNKGLCGSPLGDCNTNPASHSDPSGESVESPRAKIVMIIAALVGGVSLILIIVILYYMRRPRESVDSFRDTESPSPDSDIYFPPKEGFTFQDLIEATKRFHESYVIGRGACGTVYKAVMKSGKTIAVKKLASNREGNNIENSFRAEILTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVRNHIREHNNTLTSEILDSRVDLEDQITTNHMLTVLKLALVCTSMSPSKRPSMREVVSMLIESNEKEGNLTLTQTYHDLPTKDGI 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi44g00045 1043 SUPERFAMILY L domain-like 34 313 - -
Sebi44g00045 1043 SMART LRR_typ_2 657 680 IPR003591 -
Sebi44g00045 1043 SMART LRR_typ_2 152 175 IPR003591 -
Sebi44g00045 1043 SMART LRR_typ_2 584 608 IPR003591 -
Sebi44g00045 1043 SMART LRR_typ_2 536 560 IPR003591 -
Sebi44g00045 1043 SMART LRR_typ_2 296 320 IPR003591 -
Sebi44g00045 1043 SMART LRR_typ_2 368 391 IPR003591 -
Sebi44g00045 1043 SMART LRR_typ_2 248 272 IPR003591 -
Sebi44g00045 1043 SMART LRR_typ_2 488 512 IPR003591 -
Sebi44g00045 1043 SMART LRR_typ_2 104 128 IPR003591 -
Sebi44g00045 1043 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 288 392 - -
Sebi44g00045 1043 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 779 891 - -
Sebi44g00045 1043 Gene3D Transferase(Phosphotransferase) domain 1 891 1036 - -
Sebi44g00045 1043 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 416 731 - -
Sebi44g00045 1043 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 31 193 - -
Sebi44g00045 1043 SUPERFAMILY RNI-like 325 701 - -
Sebi44g00045 1043 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515
Sebi44g00045 1043 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 194 287 - -
Sebi44g00045 1043 ProSiteProfiles Protein kinase domain profile. 814 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi44g00045 1043 Gene3D Ribonuclease Inhibitor 413 731 IPR032675 -
Sebi44g00045 1043 SUPERFAMILY Protein kinase-like (PK-like) 790 1021 IPR011009 -
Sebi44g00045 1043 Gene3D Ribonuclease Inhibitor 285 395 IPR032675 -
Sebi44g00045 1043 Gene3D Phosphorylase Kinase; domain 1 781 890 - -
Sebi44g00045 1043 Pfam Leucine rich repeat 562 620 IPR001611 GO:0005515
Sebi44g00045 1043 Pfam Leucine rich repeat 346 405 IPR001611 GO:0005515
Sebi44g00045 1043 Gene3D Ribonuclease Inhibitor 186 284 IPR032675 -
Sebi44g00045 1043 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Sebi44g00045 1043 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Sebi44g00045 1043 Pfam Protein kinase domain 815 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi44g00045 1043 Pfam Protein kinase domain 906 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi44g00045 1043 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 571 1013 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi44g00045 Sebi-Chr44 862571 866482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi44g00045 32 924 Receptor kinase-like Gene Family AT5G56040 35.897 4.52e-156 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi44g00045 Pkinase 3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi44g00045 - - gmx:100805792 1465.67