Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi449g00009 ATGGCAGCTACAATGGATTTCTACAACAGACAACAACAAGAGCTTCAGTCAGATCCCTTTAGAGGTGATAGCCAAAACTTCATAGGCTTTGAGCAGCAACCACAACCAATTAATAATAATTCTTCTATTCTTGGCCTTAACCACCTAACCCCATCTCAGATGGCCCAGATCCAAGCCCAGATCCAGCTCCAGGCCCACCAAAACAACAACAACACCATGAGCTTCCTTGGGCCCAAGCCCATCCCCATGAAGCAAGTGGGTACCCCTCCAAAGCCCACCAAGCTCTACAGAGGGGTAAGGCAACGGCATTGGGGCAAATGGGTAGCTGAAATCAGACTCCCAAAGAACCGCACAAGGCTTTGGCTTGGAACCTTTGACACTGCAGAAGAAGCTGCTTTGGCTTATGACAGAGCAGCATACAGGCTCAGGGGTGACTTTGCTAGGCTCAATTTCCCAAACCTGAAACACCAAGGTTCATGTGTTGAAGGTGCTTTTGGTGAATACAAGCCTCTGCATTCATCTGTTGATGCAAAGCTTGATGCTATTTGTGAGAATTTGGCTGATATGCAGAAACAAGGGAAGCCAGAGAAAAGTGTGAGGTCTTCTTCTAAGAAGTCTGGTTCAAAACAAGGTTCAAAGGTGGTGGTGGCTACAACAACTCAACCACAGTTGGAGAAGAATACTTGTTGCAAAGTTGAACCTTCTTTGTCTCCTTTGGTGACTGAGAGTGAAGGCTCTGCTGATTCTTCTCCTCTGTCTGATCTTACTTTTGGGGATGTTATTGAGCCACAATGGGAAGCTGGTTCAGAGCATTTTAATCTGCAAAAGTTCCCATCTTATGAGATTGATTGGGATTCTCTGTGA 864 0.4595 MAATMDFYNRQQQELQSDPFRGDSQNFIGFEQQPQPINNNSSILGLNHLTPSQMAQIQAQIQLQAHQNNNNTMSFLGPKPIPMKQVGTPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDRAAYRLRGDFARLNFPNLKHQGSCVEGAFGEYKPLHSSVDAKLDAICENLADMQKQGKPEKSVRSSSKKSGSKQGSKVVVATTTQPQLEKNTCCKVEPSLSPLVTESEGSADSSPLSDLTFGDVIEPQWEAGSEHFNLQKFPSYEIDWDSL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi449g00009 287 MobiDBLite consensus disorder prediction 204 218 - -
Sebi449g00009 287 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 25 287 - -
Sebi449g00009 287 FunFam Ethylene-responsive transcription factor 2 94 153 - -
Sebi449g00009 287 Pfam AP2 domain 96 144 IPR001471 GO:0003700|GO:0006355
Sebi449g00009 287 ProSiteProfiles AP2/ERF domain profile. 95 152 IPR001471 GO:0003700|GO:0006355
Sebi449g00009 287 SMART rav1_2 95 158 IPR001471 GO:0003700|GO:0006355
Sebi449g00009 287 MobiDBLite consensus disorder prediction 190 218 - -
Sebi449g00009 287 SUPERFAMILY DNA-binding domain 95 152 IPR016177 GO:0003677
Sebi449g00009 287 Gene3D AP2/ERF domain 95 153 IPR036955 GO:0003700|GO:0006355
Sebi449g00009 287 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Sebi449g00009 287 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Sebi449g00009 287 CDD AP2 94 154 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi449g00009 Sebi-Chr449 455729 456820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi449g00009 37 287 AP2-EREBP Transcription Factor Family AT1G78080 58.955 3.88e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi449g00009 AP2 5.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi449g00009 K09286 - gmx:100800478 327.02