Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi448g00042 ATGGGTGCACAAAACGGCATCGTCGAAGACACAGGGATAGAGAAAGAGCAAGAGCAAGAACCATGGACGACAACAGAGGAGGAACCAACAGGCGTCGTTTTGTTCGGGAAATACGAGCTGATAAAGCTTCTTGGCGTTGGCGCGTTCGCGAAGGTGTACCACGCGCGTGACGTGAACACGGGGCAGAGCGTGGCGGTGAAGGCCGTGAGCAAACGCAAAGTCCAGAGAAACGGTTACGCGGCACACGTTATGCGCGAAGTCTCTATCATGCGCCGGCTGCGCCACCCGCACACGGTGAAACTCTTCGAGGTGTTGGCCACCAAGACCAAAATCTACTTCATCATGGAGTTCGCGGCCGGCGGCGAGCTCTTCGGCGTGGTCGCCGCCGAGGGACGGTTGACGGAGGATCTTTCCCGGCGATACTTCCGTCAATTAATCTCCGCCGTCAAGTACTGCCACTCCCGCGGCGTCTTCCACCGTGACCTCAAGCTCGACAACCTCCTCGTCGACGAGAACATGGACCTCAAAGTCACTGATTTCGGGTTGGGCGCGATTCGGGAACAGATCCGACCCGACGGTATGCTCCACACCGTTTGTGGAACTCCTGCTTACGTGGCACCGGAGATTCTCGCGAAAAAGGGCTACGACGGTGCCACTGTGGATGTATGGTCATGCGGCGTCGTTTTGTTTGTGCTCACTGCTGGGTATTTACCCTTCAATGATTACAATATTACGGTTTTGTACCGGAAGATATACAGGGGACAGTTTCGGTTCCCGAAATGGATGTCGCATGATCTTAAGAATCTCTTATCAAGGTTGTTGGACACTAATCCCAAGACGAGAATCACTTTAGATGAAGTCATGGAGGACCCATGGTTTAGTCGGGACGGGTATACGGATCTTTGGACCCGACCCATGGAACCTGAATGGGAGGAGAACCGGGTTGTGACAAAGAGTTTGAACGCGTTTGATTTGATATCCTTTTCATCCGGGTTTGACATGTCGGGTTTGTTTGCCGACCCGGAATATTCTGAATGCGTGGAACGGTTCGTCACGGGGGAGAAAACGGAGAGGGTGGCGAAAAAGGTGGAAGAGGTGGCGGAGAAAGAGAGAGTGACGGCGAGGAAAGAGAAGGACGGTTGCGGAGGAGTGAAGCTAGAAGGGTTGGATGGTAATTTTGTGATTTTGGTTGGGTTTTACCGGTTAACGGATGAATTGGTTGTGGTTGAGGTGAAAAGGAGAGAGAGAAGAGTGGGAAGCAGTGCACTTTTTTGGAGAGATGCATTAAGACCACAGCTTCTTGCATTATCTTATCAATAA 1320 0.5227 MGAQNGIVEDTGIEKEQEQEPWTTTEEEPTGVVLFGKYELIKLLGVGAFAKVYHARDVNTGQSVAVKAVSKRKVQRNGYAAHVMREVSIMRRLRHPHTVKLFEVLATKTKIYFIMEFAAGGELFGVVAAEGRLTEDLSRRYFRQLISAVKYCHSRGVFHRDLKLDNLLVDENMDLKVTDFGLGAIREQIRPDGMLHTVCGTPAYVAPEILAKKGYDGATVDVWSCGVVLFVLTAGYLPFNDYNITVLYRKIYRGQFRFPKWMSHDLKNLLSRLLDTNPKTRITLDEVMEDPWFSRDGYTDLWTRPMEPEWEENRVVTKSLNAFDLISFSSGFDMSGLFADPEYSECVERFVTGEKTERVAKKVEEVAEKERVTARKEKDGCGGVKLEGLDGNFVILVGFYRLTDELVVVEVKRRERRVGSSALFWRDALRPQLLALSYQ 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi448g00042 439 Gene3D Phosphorylase Kinase; domain 1 9 119 - -
Sebi448g00042 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Sebi448g00042 439 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Sebi448g00042 439 CDD CIPK_C 321 433 - -
Sebi448g00042 439 MobiDBLite consensus disorder prediction 1 26 - -
Sebi448g00042 439 Gene3D Kinase associated domain 1, KA1 315 438 - -
Sebi448g00042 439 Pfam Protein kinase domain 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi448g00042 439 SMART serkin_6 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi448g00042 439 Pfam NAF domain 318 376 IPR004041 GO:0007165
Sebi448g00042 439 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 31 414 - -
Sebi448g00042 439 ProSiteProfiles NAF domain profile. 315 339 IPR018451 GO:0007165
Sebi448g00042 439 FunFam Non-specific serine/threonine protein kinase 118 300 - -
Sebi448g00042 439 SUPERFAMILY Protein kinase-like (PK-like) 34 330 IPR011009 -
Sebi448g00042 439 ProSiteProfiles Protein kinase domain profile. 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi448g00042 439 FunFam Non-specific serine/threonine protein kinase 19 119 - -
Sebi448g00042 439 Gene3D Transferase(Phosphotransferase) domain 1 120 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi448g00042 Sebi-Chr448 709431 710750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi448g00042 33 439 CBL-interacting serine-threonine protein kinases AT2G30360 58.213 1.67e-169 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi448g00042 Pkinase 4.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi448g00042 - K12761 gmx:100788245 530.02