Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi448g00038 ATGTACAAGGGAAGATTAGGAGACAAAGCTCAGTTTGGATATGTTGAAACTGACCCATCTGGGCGATATGGACGTTTCAGGGATATTCTAGGCAAAGGAGCCGTGAAGGTAGTGTATAGAGCATTTGATGAGGTCCTAGGAATAGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCATTCACCAGACCAACTTCAGCGCCTATATGCAGAGGTTCATCTCCTCAAGAACTTGGACCATGACTCTATCATCACCTTCCATGATTCTTGGATCGATGCCAGTTGTAGAACCTTCAACTTCATCACTGAATTATTCACCTCTGGCACCTTAAGAGAGTATAGAAAAATGTACCCTCGAGTAGATATCAGAGCAGTGAAGAACTGGGCTCGCCAGATTCTGAACGGTTTGGAGTATTTACACAGCCATGATCCTCCTGTGATACATAGAGACCTCAAATGTGATAATATATTTGTTAATGGCCATCTGGGGCAGGTCAAGATTGGTGACTTAGGCCTTGCAGCCATTCTTCGTGGCTCCCAACATGCGCACAGTGTTATAGGCAATTTCTCTTGCTCTTGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATACAATGAGCTAGTAGACATATACTCCTTTGGGATGTGTATGATAGAGCTGTTTACTTCAGAGTTCCCATACAGCGAGTGCTCCAACCCTGCTCAAATATACAAGAAAGTTACTTCTGGGAAGCTGCCAGAAGCATTTTATAGAATCCATGATTTGGAAGCCCAGAGGTTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGGTTATCAGCAAAGGAGCTCTTGTTAGACCCATTTTTAGCCACAGACCAACTTGGCTCGCCCTTGCCAAGCCCAACATTACCTAGAAAACATACTCCTACACTCAATTTCACTGATGCAGTTGAGAAAGAGAAAACTTCATTAAGTGACCACACAAAGAGCACATACATGACAATCACTGGATCAATAAATAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAGATTTCTAACAAAACTGGGCTCACGAGAAATATATACTTCCCATTCAACACCATAAATGACACTGCTATTGAGGTGGCAATGGAGATGGTTAAAGAACTCGAAATCAGTGACTTGGAACCATTGGAGATTGCTGAAATGATAGAGGAGGAGATATCAGCTTTAGTTCCAACATGGAAGGATTGGGGCAATTCAAAGTATCAAAGACAATATAGTTTTAACTATGAAGAAGAGGATGATATCAGTAACCACCATCCTTTCTTCTCATCCTCTTCTCGCTCTTCCTCTCATGGTTCTCTCCCAATGTTTGGTTCTTCCTACAAGAACAACATCCATCTTTGTGGGAACCATTACCCTCTTGCTCAAGATTGGTCTCAAGATGATCTATTTATGAATGATGATGAAAGCTCTCAAAGCTCAATGAACTCCTTGAAGTGTTTCAATTTCCATTGCTGCGACTCAGGAAATGAAGATGAGCATCATCCAACACTAGTAGTAGGAGCAGAACCACTTAGCTTCACACCAAAGGCCAACAAAATGAGCACAAGATTCTGTCCTCGAGAAGAGGCTGATTTCATCAAACAGTTTTACAACATGAGAATGGATTCTCACTCTCACATGTGTCATGGATCAGGGCATGGATATAAGAGGCTGACAAGGATTCGTTCCTATGTGGATGTGAGGAGACAGCAACTGCAAAGATCACTGATGGAGGAGATGCACAAGAAAAGGATGTTCAAGACGGTTGGTACCATTCAGAACATTGGGTTTCAGAATCCAGAAGGAGATGGATGTTTTTCTTGTTGA 1857 0.4206 MYKGRLGDKAQFGYVETDPSGRYGRFRDILGKGAVKVVYRAFDEVLGIEVAWNQVKLGDVFHSPDQLQRLYAEVHLLKNLDHDSIITFHDSWIDASCRTFNFITELFTSGTLREYRKMYPRVDIRAVKNWARQILNGLEYLHSHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQHAHSVIGNFSCSCTPEFMAPELYEEEYNELVDIYSFGMCMIELFTSEFPYSECSNPAQIYKKVTSGKLPEAFYRIHDLEAQRFVGKCLANVSERLSAKELLLDPFLATDQLGSPLPSPTLPRKHTPTLNFTDAVEKEKTSLSDHTKSTYMTITGSINNEEDDTVFLKVQISNKTGLTRNIYFPFNTINDTAIEVAMEMVKELEISDLEPLEIAEMIEEEISALVPTWKDWGNSKYQRQYSFNYEEEDDISNHHPFFSSSSRSSSHGSLPMFGSSYKNNIHLCGNHYPLAQDWSQDDLFMNDDESSQSSMNSLKCFNFHCCDSGNEDEHHPTLVVGAEPLSFTPKANKMSTRFCPREEADFIKQFYNMRMDSHSHMCHGSGHGYKRLTRIRSYVDVRRQQLQRSLMEEMHKKRMFKTVGTIQNIGFQNPEGDGCFSC 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi448g00038 618 ProSiteProfiles Protein kinase domain profile. 24 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi448g00038 618 SMART serkin_6 24 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi448g00038 618 FunFam Probable serine/threonine-protein kinase WNK1 8 105 - -
Sebi448g00038 618 Pfam Protein kinase domain 28 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi448g00038 618 FunFam probable serine/threonine-protein kinase WNK9 107 293 - -
Sebi448g00038 618 SUPERFAMILY Protein kinase-like (PK-like) 26 331 IPR011009 -
Sebi448g00038 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 488 - -
Sebi448g00038 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Sebi448g00038 618 Gene3D Transferase(Phosphotransferase) domain 1 107 293 - -
Sebi448g00038 618 CDD STKc_WNK 22 288 - -
Sebi448g00038 618 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi448g00038 Sebi-Chr448 635330 638695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi448g00038 12 430 MAP Kinase Kinase Kinase AT3G51630 67.619 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi448g00038 Pkinase 8.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi448g00038 K08867 - gmx:100816187 1011.91