Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi448g00030 ATGGATGGAGCTATTGAGATAAATCAAGGCAACAACATTTTGTCTTTAGAGTTACAGCAGGCACTTGAAGCCCCATTTGATTTAAATGAAGCCCCATTTGATTTAAATGAGTTGCCATTAGAAGAAGAAAATCTTTCTAATGATTTGGATACAATATTTGAACCATTAGAAGAGGAAAATCCTTCCCATGCTTCGAATATAATATTTGAACCATTTGTTGGTCAATGTTTCTCAAACGAGGAAAAAGCTTTGGAATTTTATCAGAGATATGCTAAGCAACATGGATTTTCAGTTCGAAAGGCTCGCTTTGATAAAAACAAAAATGGAGAAGTTAGAAGGCGTGATTTCTTTTGTCATCGCGCGGGAAGGCAACCACTCAAAATTGTTTACCCATCAAAGGATCAACGACATCGGTCATCGGCACGCTCTGACTGCAAGGCTCATATGCGTATTAAACTTAAAAAATATGTTGATATATTCCCTGATGAATGGCATGTTGTTGAGTTTATTGCCGAACATAACCATGAGTTGCTTTCTGAAGAAGAGACGCGCTTTCTACGATCTCACCGCACCATTACTAAAGAAGATGAAAATTTGTCGCTTGGTGAAGAAGGGCCATTGCTTGTAGATGAGGAAAATGGTGAAGATAACAATGAAATGGAGATGATTGATCTTTTGCAATGCCCTCCAAAGTCAAAGACCAAAGGGCGTCCAAAGCAAAAACGTTTAAGGGGCGGAAAAGAATTAAGCATCAACAAACAAGTGAAGAAATGTAGATTATGCAAACATCCTGGTCATAACTTCACTACTTGA 813 0.3801 MDGAIEINQGNNILSLELQQALEAPFDLNEAPFDLNELPLEEENLSNDLDTIFEPLEEENPSHASNIIFEPFVGQCFSNEEKALEFYQRYAKQHGFSVRKARFDKNKNGEVRRRDFFCHRAGRQPLKIVYPSKDQRHRSSARSDCKAHMRIKLKKYVDIFPDEWHVVEFIAEHNHELLSEEETRFLRSHRTITKEDENLSLGEEGPLLVDEENGEDNNEMEMIDLLQCPPKSKTKGRPKQKRLRGGKELSINKQVKKCRLCKHPGHNFTT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi448g00030 270 Pfam FAR1 DNA-binding domain 85 178 IPR004330 -
Sebi448g00030 270 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 41 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi448g00030 Sebi-Chr448 520085 521094 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi448g00030 FAR1 3.9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi448g00030 - - atri:130810242 174.096