Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi447g00027 ATGGAGAGCTTAAAATCTCCTTTCAAGGGAGTTGTTAATGATATTCGAGGAAGAGCAAAGTGTTATAAAGACGATTGGACTTGTGGTTTCCGTTCAGGAATTGGGTTATTGGCCCCAACTACCTATATTTTCTTTGCTTCTGCTCTTCCTGTTATTGCCTTTGGTGAGCAGCTGAATAGAGACACAGATGGAAGGTTGAGCACGGTAGAAACACTGGCTTCTACGGCCATTTGTGGAATCATACACTCAATTTTTGGGGGCCAGCCACTTCTTATTGTAGGAGTTGCAGAACCCACTATCATCATGTACACATACTTGTACAACTTTGCTAAAGATAGGGATGGCTTGGGACAAGAACTCTTTTTGGCTTGGGCAGGATGGGTTTGTGTTTGGACTGCTCTCTTGCTGTTTCTTCTAGCAATATTCAATGCTGCCAGTATCATCAACAGATTCACAAGGGTTGCGGAAGAACTTTTTGGCATGTTGATTGCAGTTCTGTTTATTCAAGAAGCTGTCAAGGGGATGGTAAAGGAATTTGAGGTTCCTAAAAATGAAAACTCCACATCAGAGCAGTACCAATTTCATTGGCTCTATGTGAATGGGTTACTGGGTGTTATATTCACATTTGGCCTTCTCTATACTGCATTGAAGAGCAGAAGAGCAAGGTCCTGGTTATATGGGACAGGGTGGTTGAGAAGTTTTATTGCAGACTATGGGGTGCCTTTTATGGTGGTAGTGTGGACAGCAATGTCATTCGGAGTGCCAAGAAAACTACCTTCTGAAATTCCAAGAAGACTTGTTACTCCTTTGGCTTGGGAATCTGCATCTTTACACCATTGGACAGTAATCAAAGACATGGGGAAAGTTTCTCCAACATATATTTTTGCTGCTTTTATTCCTGCCTTGATGGTAGCAGGGCTTTACTTCTTTGACCATAGTGTTGCTTCTGGGATGGCGCAACAGAAGGAATTCAATCTCAAGAAACCTTCTGCTTATCATTATGACATTTTGTTACTTGGATTCATGACTTTGCTTTGTGGATTGATTGGTTTACCCCCTTCAAATGGTGTTCTGCCTCAATCCCCCATGCACACCAAGAGCCTTGCTGTTCTCAAGGGTCTGATGATCCGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAAAAAGAAAGCTAGCAACACTGAAATCTATGGGAAGATACAAGCAGTGTTTGTAGAAATGGACAGCAGCCCAGTTACTTGTGTGGAAAAAGAACTAGAAAGCCTGAAAGAGATTATCCTAAAAGGTGAAGATAAAGGAGACAACAAAAAGGATACCTTTGACCCTGAGAAGATAGATGCACACTTGCCTGTTAGAGTAAATGAGCAGAGAGTGAGTAATCTTTTACAAGCACTCTTTGTTGGAGCATCAGTTTTTGCTATGCCTATCATAAAAAAGATTCCAACTTCTGTTCTGTGGGGATACTTTGCATACATGGCAATTGATAGTCTTCCCGGAAACCAATTCTGGGAAAGGATACTGCTTCTCTTTGTAACACCTAGACGGTGGTACAAGTTGTTAGAGGGGGATCATGCTTCCTTTGTGGAATCAGTACCAATCAGATACATAATCTTCTTCACAATCTTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAATGACATGGATTCCAACTGCTGGAATCCTGTTCCCCTTGCCTTTCTTTGTGTTGATCTTGGTGAGGAAGTATATTCTTCCCAAGCTGTTCAATCCTCACCATCTAAGTGAACTAGATAGAGCTGAATATGAGGAAATTGCTGGTGCTCCAAGACTTTCTTTTAGTATGGAATCACCTAGTTTTGGATCAAGGGAAGTATCTGATAGTGAAATATTAGATGAATTAACTACTAGCAGAGGAGAGCTGAAGGTCAGAACTGTTAGCTTTAGAGAGGAAAGGCATGGTCAGGGCTTGCAGATCTATCCTGATGAAATAGTTTGTGAAAATGAATCATCAGAGAGTTAG 2004 0.4122 MESLKSPFKGVVNDIRGRAKCYKDDWTCGFRSGIGLLAPTTYIFFASALPVIAFGEQLNRDTDGRLSTVETLASTAICGIIHSIFGGQPLLIVGVAEPTIIMYTYLYNFAKDRDGLGQELFLAWAGWVCVWTALLLFLLAIFNAASIINRFTRVAEELFGMLIAVLFIQEAVKGMVKEFEVPKNENSTSEQYQFHWLYVNGLLGVIFTFGLLYTALKSRRARSWLYGTGWLRSFIADYGVPFMVVVWTAMSFGVPRKLPSEIPRRLVTPLAWESASLHHWTVIKDMGKVSPTYIFAAFIPALMVAGLYFFDHSVASGMAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKGLMIRRKMVKSAKESIKKKASNTEIYGKIQAVFVEMDSSPVTCVEKELESLKEIILKGEDKGDNKKDTFDPEKIDAHLPVRVNEQRVSNLLQALFVGASVFAMPIIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPRRWYKLLEGDHASFVESVPIRYIIFFTIFQCVYFLVCFGMTWIPTAGILFPLPFFVLILVRKYILPKLFNPHHLSELDRAEYEEIAGAPRLSFSMESPSFGSREVSDSEILDELTTSRGELKVRTVSFREERHGQGLQIYPDEIVCENESSES 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi447g00027 667 FunFam probable boron transporter 2 18 60 - -
Sebi447g00027 667 Gene3D Helical hairpin bin 18 60 - -
Sebi447g00027 667 PRINTS HCO3- transporter superfamily signature 145 157 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sebi447g00027 667 PRINTS HCO3- transporter superfamily signature 320 333 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sebi447g00027 667 PRINTS HCO3- transporter superfamily signature 51 62 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sebi447g00027 667 PRINTS HCO3- transporter superfamily signature 166 178 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sebi447g00027 667 PRINTS HCO3- transporter superfamily signature 237 246 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sebi447g00027 667 PANTHER ANION EXCHANGE PROTEIN 5 600 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sebi447g00027 667 Pfam HCO3- transporter family 200 372 IPR011531 GO:0006820|GO:0016020
Sebi447g00027 667 Pfam HCO3- transporter family 452 542 IPR011531 GO:0006820|GO:0016020
Sebi447g00027 667 Pfam HCO3- transporter family 7 183 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi447g00027 Sebi-Chr447 344477 347625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi447g00027 1 659 Antiporters AT1G74810 68.209 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi447g00027 K24194 - gmx:100811184 1057.36