Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi446g00044 ATGTTTAGGTCTTTGGCTGGGAAGATACAGAACGGTCTTTCACTACTCTTTGTACACAGAAGGCCTACTACTACACTCAGCTACTTCCATGAAGACTACTTAGCCGAAGCTACCAGAGATGATGTTATTAGGAAAGGATATTTTGCTGTTGTTGCAACAAAGGATGGAGATACCAAAAGGTTCATCGTTAAATTAGACTACTTGGCTGATCCTGCTTTCATAAGACTGCTGGACAAAGCTCGGGAAGAATATGGTTTCATGCACAAGGGAACTCTTTCAGTTCCATGTCTGCCTCAAGATTTACAGAACATTCTAGATGCTGCAGGGAGATCGTAG 336 0.4226 MFRSLAGKIQNGLSLLFVHRRPTTTLSYFHEDYLAEATRDDVIRKGYFAVVATKDGDTKRFIVKLDYLADPAFIRLLDKAREEYGFMHKGTLSVPCLPQDLQNILDAAGRS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi446g00044 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 103 IPR003676 GO:0009733
Sebi446g00044 111 Pfam Auxin responsive protein 36 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi446g00044 Sebi-Chr446 624876 625211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi446g00044 43 96 Calmodulin-binding Proteins AT3G43120 44.444 8.11e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi446g00044 - K14488 gmx:100808634 126.716