Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi446g00043 ATGTTTAAGTCATTCGCTGGGAGGAAGATACAAAAGGGTCTTTCACACTTTGTACACAAAAGACCCGCACTGAGCTACTTGAATGAGGAGTTAGTGGAAGAAGGCACAAGTGTTGTGGTGAGAGATAATGTTAAAAAAGGATATTTTGCTGTTGTTGCAATGAAGGATGGAGAAACCAAAAAGTTCATTGTTGGGTTAAATTATTTAACTGATCCCGCATTCTTAGGTCTACTGGACCAAGCTCGGGAAGAGTATGGCTTCGTACACAAGGGAGCTCTTGCAGTTCCTTGTCGCCCTCAGGATTTACAGAACATTCTAGATGGTCTAAGAGCGTAG 336 0.4226 MFKSFAGRKIQKGLSHFVHKRPALSYLNEELVEEGTSVVVRDNVKKGYFAVVAMKDGETKKFIVGLNYLTDPAFLGLLDQAREEYGFVHKGALAVPCRPQDLQNILDGLRA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi446g00043 111 Pfam Auxin responsive protein 41 107 IPR003676 GO:0009733
Sebi446g00043 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi446g00043 Sebi-Chr446 622366 622701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi446g00043 43 106 Calmodulin-binding Proteins AT3G43120 42.188 8.26e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi446g00043 - K14488 gmx:100775971 141.739