Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi446g00040 ATGATGGTTTGGTCTTTCTTCGGCAAGATACATGATGGCATCTCTGTATTCTTTGCACAGAGGAAATTAGAAGCACTGAGCAGCAGCTTCAATGAAGATAGGGGAATGGAGGTGCCTGAAGGTGATGTAATGGAAGGACATTTTGTAGTTTTTGCTAACAAGGATCAACTAACCAAACGGTTTGTTGTTGATTTGCACTATTTGAGTGACCCTGCTTTTCTGGGACTGCTGGAACGGGCAAAAGAAGAGTATGGCTTCAAACAGAAGGGGGCTTTGCTAATTCCTTGCCATCCTCAAGAACTAGAGAACATTCTAGCCAGAAGAAAGACGTAG 333 0.4324 MMVWSFFGKIHDGISVFFAQRKLEALSSSFNEDRGMEVPEGDVMEGHFVVFANKDQLTKRFVVDLHYLSDPAFLGLLERAKEEYGFKQKGALLIPCHPQELENILARRKT 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi446g00040 110 Pfam Auxin responsive protein 37 106 IPR003676 GO:0009733
Sebi446g00040 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi446g00040 Sebi-Chr446 605746 606078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi446g00040 14 96 Calmodulin-binding Proteins AT3G43120 36.471 1.67e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi446g00040 - K14488 gmx:100809715 149.058