Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi446g00033 ATGGTTTATGCACAGCTTAATAAGCCTGAGGAAGAGAGCATCCCTTTACCGGTTGATGAAGATTTGCCTGGAATGGGCCAGTACTATTGCCTTCACTGCGATCGATACTTTTCCAATGTAGCTGTGAGGGATGAGCATTTTAAGACCAAACGACACAAGAAGCGTATGAAACAAATGATGGGTCCTGCACCCCACACTCAACTTGATGCCGAATTAGCTGCTGGGATGGGTATGCCAGATAATGGACCAAAACTAATGTCTATGTAA 267 0.4457 MVYAQLNKPEEESIPLPVDEDLPGMGQYYCLHCDRYFSNVAVRDEHFKTKRHKKRMKQMMGPAPHTQLDAELAAGMGMPDNGPKLMSM 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi446g00033 88 ProSitePatterns Zinc finger C2H2 type domain signature. 30 52 IPR013087 -
Sebi446g00033 88 PANTHER EXPRESSED PROTEIN 1 88 - -
Sebi446g00033 88 Pfam Zinc-finger double-stranded RNA-binding 27 53 IPR022755 -
Sebi446g00033 88 SUPERFAMILY beta-beta-alpha zinc fingers 15 79 IPR036236 -
Sebi446g00033 88 FunFam Zinc finger protein 593 15 78 - -
Sebi446g00033 88 Gene3D Classic Zinc Finger 15 78 - -
Sebi446g00033 88 SMART ZnF_U1_5 25 59 IPR003604 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi446g00033 1 87 C2H2 Transcription Factor Family AT2G36930 77.011 6.74e-48 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi446g00033 K14821 - gmx:100499707 179.489